RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 OCA2Q04671 838 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 SEMA3AQ14563 771 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 HIF1AQ16665 826 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 PCID2Q5JVF3 399 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 ZNF787Q6DD87 383 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 ISLR2Q6UXK2 745 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 TAX1BP1Q86VP1 789 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 C2orf73Q8N5S3 287 aaPredicted RBP22.2■■□□□ 1.14
C9orf47-202ENST00000375850 OR11G2Q8NGC1 345 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 LKAAEAR1Q8TD35 194 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 FAR1Q8WVX9 515 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 ATG4AQ8WYN0 398 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 BAG1Q99933 345 aaPredicted RBP22.2■■□□□ 1.14
C9orf47-202ENST00000375850 ZNF304Q9HCX3 659 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 PAK5Q9P286 719 aa22.2■■□□□ 1.14
C9orf47-202ENST00000375850 HYKKA2RU49 373 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 IQCF5A8MTL0 148 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 CD3EAPO15446 510 aaKnown RBP22.19■■□□□ 1.14
C9orf47-202ENST00000375850 PHF2O75151 1096 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 HPP00738 406 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 APRTP07741 180 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 FDXRP22570 491 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 RPS3P23396 243 aaKnown RBP eCLIP22.19■■□□□ 1.14
C9orf47-202ENST00000375850 EMP3P54852 163 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 CDC16Q13042 620 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 WASHC2DQ5SRD0 308 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 RPUSD3Q6P087 351 aaKnown RBP22.19■■□□□ 1.14
C9orf47-202ENST00000375850 OTOAQ7RTW8 1153 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 TICAM1Q8IUC6 712 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 CCDC89Q8N998 374 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 CRB3Q9BUF7 120 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 SOX17Q9H6I2 414 aaPredicted RBP22.19■■□□□ 1.14
C9orf47-202ENST00000375850 SPATA7Q9P0W8 599 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 CTSFQ9UBX1 484 aa22.19■■□□□ 1.14
C9orf47-202ENST00000375850 ZNF282Q9UDV7 671 aaPredicted RBP22.19■■□□□ 1.14
C9orf47-202ENST00000375850 TTC7AQ9ULT0 858 aaPredicted RBP22.19■■□□□ 1.14
C9orf47-202ENST00000375850 POLEQ07864 2286 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 PCDH17O14917 1159 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 C1orf105O95561 183 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 ACPPP15309 386 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 MCM3P25205 808 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 GRIA1P42261 906 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 OR1D4P47884 311 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 VSX2P58304 361 aaPredicted RBP22.18■■□□□ 1.14
C9orf47-202ENST00000375850 MFAP5Q13361 173 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 MUM1Q2TAK8 710 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 C4orf22Q6V702 233 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 PARP9Q8IXQ6 854 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 KRT222Q8N1A0 295 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 RNF10Q8N5U6 811 aaKnown RBP22.18■■□□□ 1.14
C9orf47-202ENST00000375850 OR2L3Q8NG85 312 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 GRHL3Q8TE85 626 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 SKA2Q8WVK7 121 aaPredicted RBP22.18■■□□□ 1.14
C9orf47-202ENST00000375850 MIEF2Q96C03 454 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 THOC3Q96J01 351 aaKnown RBP22.18■■□□□ 1.14
C9orf47-202ENST00000375850 IL22Q9GZX6 179 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 P2RY12Q9H244 342 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 EIF2B3Q9NR50 452 aaKnown RBP22.18■■□□□ 1.14
C9orf47-202ENST00000375850 CDC14AQ9UNH5 594 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 ANKRD12Q6UB98 2062 aa22.18■■□□□ 1.14
C9orf47-202ENST00000375850 MAP2K7O14733 419 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 PFDN6O15212 129 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 PRPF4O43172 522 aaKnown RBP eCLIP22.17■■□□□ 1.14
C9orf47-202ENST00000375850 CTSVO60911 334 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 NDUFS3O75489 264 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 USP1O94782 785 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 COL8A1P27658 744 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 FAM180AQ6UWF9 173 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 RNF44Q7L0R7 432 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 TMEM151BQ8IW70 566 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 STT3BQ8TCJ2 826 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.17■■□□□ 1.14
C9orf47-202ENST00000375850 MVB12AQ96EY5 273 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 CNDP1Q96KN2 507 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 CIDEBQ9UHD4 219 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 CSAG2Q9Y5P2 127 aa22.17■■□□□ 1.14
C9orf47-202ENST00000375850 IGLV3-12A0A075B6K2 115 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 H3BMM5 538 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 E2F3O00716 465 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 ZGLP1P0C6A0 271 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 ERVK-10P10266 1014 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 ATP5DP30049 168 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 INAQ16352 499 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 RNF187Q5TA31 235 aaPredicted RBP22.16■■□□□ 1.14
C9orf47-202ENST00000375850 SLC13A5Q86YT5 568 aaPredicted RBP22.16■■□□□ 1.14
C9orf47-202ENST00000375850 BCORP1Q8N888 145 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 OR2A1Q8NGT9 310 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 ZFYVE21Q9BQ24 234 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 CHRAC1Q9NRG0 131 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 TREX1Q9NSU2 369 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 MARCH4Q9P2E8 410 aaPredicted RBP22.16■■□□□ 1.14
C9orf47-202ENST00000375850 CREBBPQ92793 2442 aa22.16■■□□□ 1.14
C9orf47-202ENST00000375850 NUP210LQ5VU65 1888 aa22.15■■□□□ 1.14
C9orf47-202ENST00000375850 A0A1B0GUH1 482 aa22.15■■□□□ 1.14
C9orf47-202ENST00000375850 VPS26AO75436 327 aa22.15■■□□□ 1.14
C9orf47-202ENST00000375850 CMPK1P30085 196 aa22.15■■□□□ 1.14
C9orf47-202ENST00000375850 NPY2RP49146 381 aa22.15■■□□□ 1.14
C9orf47-202ENST00000375850 AP2B1P63010 937 aa22.15■■□□□ 1.14
C9orf47-202ENST00000375850 KLC1Q07866 573 aa22.15■■□□□ 1.14
C9orf47-202ENST00000375850 SHISA6Q6ZSJ9 500 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms