RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 EIF3FO00303 357 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 IFRD1O00458 451 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 NUAK1O60285 661 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 BCL10O95999 233 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 HIST1H2AGP0C0S8 130 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 CYP2A6P11509 494 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 HIST1H2ADP20671 130 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 IRS1P35568 1242 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 GGT5P36269 586 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 DNASE1L3Q13609 305 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 SELPLGQ14242 412 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 IMPG1Q17R60 797 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 PGS1Q32NB8 556 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 PRSS36Q5K4E3 855 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 CDKL4Q5MAI5 379 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 ZNF648Q5T619 568 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 RNF165Q6ZSG1 346 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 SPRED2Q7Z698 418 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 LIX1Q8N485 282 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 ZNF557Q8N988 423 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 TRPV3Q8NET8 790 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 BADQ92934 168 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 USP7Q93009 1102 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 HIST1H2AHQ96KK5 128 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 HIST1H2AJQ99878 128 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 H2AFJQ9BTM1 129 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 EHD1Q9H4M9 534 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 LRTM1Q9HBL6 345 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 CLOCKO15516 846 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 JRKO75564 520 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 C8GP07360 202 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 ZNF30P17039 623 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 HTR1EP28566 365 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 ETV3P41162 512 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 OR4D2P58180 307 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 MAD2L1Q13257 205 aaPredicted RBP13.6□□□□□ -0.23
MSH5-202ENST00000375740 PWP1Q13610 501 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 DSG4Q86SJ6 1040 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 MFSD2AQ8NA29 543 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 SNX19Q92543 992 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 DHRS1Q96LJ7 313 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 CGREF1Q99674 301 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 KLHL25Q9H0H3 589 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 AGPAT4Q9NRZ5 378 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 OAZ3Q9UMX2 235 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 KRT87PA6NCN2 255 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 TLL1O43897 1013 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 GPIP06744 558 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 CTSLP07711 333 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 MPC1LP0DKB6 136 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 SYN1P17600 705 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 FASP25445 335 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 NNMTP40261 264 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 GSSP48637 474 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 MTPNP58546 118 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 SMU1Q2TAY7 513 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 POM121L1PQ3SYA9 428 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 BEND7Q8N7W2 519 aaPredicted RBP13.6□□□□□ -0.23
MSH5-202ENST00000375740 TNIP2Q8NFZ5 429 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 SP7Q8TDD2 431 aaPredicted RBP13.6□□□□□ -0.23
MSH5-202ENST00000375740 ARMC5Q96C12 935 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 PYCR2Q96C36 320 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 BIRC7Q96CA5 298 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 ZBTB18Q99592 522 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 P2RY13Q9BPV8 354 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 RIOK2Q9BVS4 552 aaKnown RBP13.6□□□□□ -0.23
MSH5-202ENST00000375740 SLC29A3Q9BZD2 475 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 DPY30Q9C005 99 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 FANCEQ9HB96 536 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 PALMDQ9NP74 551 aa13.6□□□□□ -0.23
MSH5-202ENST00000375740 SGTAO43765 313 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 CLPXO76031 633 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 PDYNP01213 254 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 HRH2P25021 359 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 ELK4P28324 431 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 HPCAL1P37235 193 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 CARTPTQ16568 116 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 AASDHQ4L235 1098 aaPredicted RBP13.59□□□□□ -0.23
MSH5-202ENST00000375740 PLEKHS1Q5SXH7 462 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 CACHD1Q5VU97 1274 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 FBXO46Q6PJ61 603 aaPredicted RBP13.59□□□□□ -0.23
MSH5-202ENST00000375740 MROQ9BYG7 248 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 MARK1Q9P0L2 795 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 KIAA0100Q14667 2235 aaKnown RBP13.59□□□□□ -0.23
MSH5-202ENST00000375740 UPK3BL1B0FP48 263 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 UPK3BL2E5RIL1 263 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 GFYI3L273 518 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 TOR1BO14657 336 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 EI24O14681 340 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 AXIN1O15169 862 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 KRT6AP02538 564 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 KRT6BP04259 564 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 KRT6CP48668 564 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 NEK2P51955 445 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 PPIGQ13427 754 aaKnown RBP eCLIP13.59□□□□□ -0.235e-7■■■■□ 21.7
MSH5-202ENST00000375740 PTCHD3Q3KNS1 767 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 INAVAQ3KP66 663 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 FAM174BQ3ZCQ3 159 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 TMEM240Q5SV17 173 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms