RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 BCDIN3DQ7Z5W3 292 aaKnown RBP11.49□□□□□ -0.57
MCF2L-202ENST00000375597 TMEM132CQ8N3T6 1108 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 ARL14EPQ8N8R7 260 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-202ENST00000375597 BPIFB1Q8TDL5 484 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 UBASH3BQ8TF42 649 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 EID2BQ96D98 161 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 HIST1H2AHQ96KK5 128 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 HIST1H2AJQ99878 128 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 COPS4Q9BT78 406 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 H2AFJQ9BTM1 129 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 OSBPL10Q9BXB5 764 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 NLE1Q9NVX2 485 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-202ENST00000375597 IL37Q9NZH6 218 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 SLC6A14Q9UN76 642 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 GPC6Q9Y625 555 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-202ENST00000375597 CEP290O15078 2479 aa11.49□□□□□ -0.57
MCF2L-202ENST00000375597 MYLKQ15746 1914 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 FAM92AA1XBS5 289 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 HTR3EA5X5Y0 456 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 J3KTA2 159 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 VPS4BO75351 444 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 IGLV3-25P01717 112 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 TYMPP19971 482 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ITGALP20701 1170 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 RRM2P31350 389 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 S100A5P33763 92 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 KRT20P35900 424 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 CSKP41240 450 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 GSTM4Q03013 218 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 PTCHD3Q3KNS1 767 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 NIPAL1Q6NVV3 410 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 C8orf82Q6P1X6 216 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 TMC5Q6UXY8 1006 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 CELF2-AS1Q8N7Q2 184 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF548Q8NEK5 533 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 VANGL1Q8TAA9 524 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF420Q8TAQ5 688 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 PPP3R2Q96LZ3 170 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 INTS6Q9UL03 887 aaKnown RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 SNX6Q9UNH7 406 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 H3BM21 787 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 SLC19A1P41440 591 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ALDH9A1P49189 494 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 DAPP51397 102 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 SPIBQ01892 262 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 IRF8Q02556 426 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 TAF1AQ15573 450 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■■■■□ 25.6
MCF2L-202ENST00000375597 SLC16A12Q6ZSM3 486 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ADAMTSL2Q86TH1 951 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 MSRB3Q8IXL7 192 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 APCDD1Q8J025 514 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 LILRA3Q8N6C8 439 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 OR9Q2Q8NGE9 314 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 RHEBL1Q8TAI7 183 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ACPTQ9BZG2 426 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 RNF38Q9H0F5 515 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 EHD1Q9H4M9 534 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ARNT2Q9HBZ2 717 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 TUBA8Q9NY65 449 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ZIM2Q9NZV7 527 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 WDR87Q6ZQQ6 2873 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 H0YJX3 145 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 CLIC1O00299 241 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 SEC14L2O76054 403 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 FHP07954 510 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 UMPSP11172 480 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 OGNP20774 298 aaKnown RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 SSTR4P31391 388 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 PREPP48147 710 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 PSMD8P48556 350 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 ATP4BP51164 291 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 TMBIM6P55061 237 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 RPP38P78345 283 aaKnown RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 CHIT1Q13231 466 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 XKR6Q5GH73 641 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 TAGAPQ8N103 731 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 TRUB1Q8WWH5 349 aaKnown RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 SCLYQ96I15 445 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 THUMPD1Q9NXG2 353 aaKnown RBP11.48□□□□□ -0.57
MCF2L-202ENST00000375597 GNPTGQ9UJJ9 305 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 DUSP12Q9UNI6 340 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 TPRKBQ9Y3C4 175 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 PMF1-BGLAPU3KQ54 211 aa11.48□□□□□ -0.57
MCF2L-202ENST00000375597 SBF1O95248 1867 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 MTMR11A4FU01 709 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TAF4O00268 1085 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 MANBAO00462 879 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TAPBPO15533 448 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 AQP9O43315 295 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 COCHO43405 550 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TSC22D2O75157 780 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 FAM163BP0C2L3 166 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 LIPAP38571 399 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 KIR3DL1P43629 444 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 SBSNQ6UWP8 590 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF347Q96SE7 839 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms