RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SLC13A3Q8WWT9 602 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 WDR34Q96EX3 536 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ZDHHC5Q9C0B5 715 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TRPV5Q9NQA5 729 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ACTR3BQ9P1U1 418 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TMEM98Q9Y2Y6 226 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 F5P12259 2224 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 AQP12BA6NM10 295 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RNASEH2AO75792 299 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 C7P10643 843 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PEX2P28328 305 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SLC7A1P30825 629 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TRIM23P36406 574 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ATXN3P54252 364 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TBPL1P62380 186 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 YBX1P67809 324 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 STARD3Q14849 445 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TRIP10Q15642 601 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TMEM196Q5HYL7 178 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 KIAA1161Q6NSJ0 714 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NANOGP8Q6NSW7 305 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 KIAA1211LQ6NV74 962 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 FAM83HQ6ZRV2 1179 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 AMZ2Q86W34 360 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PDSS2Q86YH6 399 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 AQP12AQ8IXF9 295 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 LRRC56Q8IYG6 542 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TP53I13Q8NBR0 393 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DNAJB14Q8TBM8 379 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 LRGUKQ96M69 825 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ALG2Q9H553 416 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ZNF576Q9H609 170 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NANOGQ9H9S0 305 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 BRF2Q9HAW0 419 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SPATA6Q9NWH7 488 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SLAMF8Q9P0V8 285 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 GMPR2Q9P2T1 348 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ZFR2Q9UPR6 939 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DLGAP4Q9Y2H0 992 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PCYT1BQ9Y5K3 369 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 KCNE2Q9Y6J6 123 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PLRG1O43660 514 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 AMD1P17707 334 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ATP6V1B2P21281 511 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 GSK3BP49841 420 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DGKQP52824 942 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RPS21P63220 83 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 IRF4Q15306 451 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PLA2G4EQ3MJ16 856 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RABL3Q5HYI8 236 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 C10orf62Q5T681 223 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 LPCAT4Q643R3 524 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SDE2Q6IQ49 451 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 OR8J3Q8NGG0 315 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DNAJB8Q8NHS0 232 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 HHIPQ96QV1 700 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CGREF1Q99674 301 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 LGR4Q9BXB1 951 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 C1QTNF2Q9BXJ5 285 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NEUROG3Q9Y4Z2 214 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PCDHGA11Q9Y5H2 935 aa17.44■□□□□ 0.38
HLA-DQB1-201ENST00000374943 KCNH1O95259 989 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PGRP06401 933 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SDC1P18827 310 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 LIPEQ05469 1076 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 FGL2Q14314 439 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 AAK1Q2M2I8 961 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 FAM174BQ3ZCQ3 159 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TMEM259Q4ZIN3 620 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DOK6Q6PKX4 331 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SLCO4C1Q6ZQN7 724 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SYTL1Q8IYJ3 562 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 LILRA2Q8N149 483 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CATSPER1Q8NEC5 780 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 GTF2H4Q92759 462 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TESCQ96BS2 214 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 APIPQ96GX9 242 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 UHRF1Q96T88 793 aaPredicted RBP17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 MKRN2Q9H000 416 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 EHD1Q9H4M9 534 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 WDR26Q9H7D7 661 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 MBNL1Q9NR56 388 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 FBXL12Q9NXK8 326 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 AP4S1Q9Y587 144 aa17.43■□□□□ 0.38
HLA-DQB1-201ENST00000374943 KMOO15229 486 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 HTR1EP28566 365 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SPANXN4Q5MJ08 99 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 METRNLQ641Q3 311 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CYP2R1Q6VVX0 501 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 EP400NLQ6ZTU2 488 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 MSANTD1Q6ZTZ1 278 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RALGPS2Q86X27 583 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DCUN1D3Q8IWE4 304 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 KRTCAP2Q8N6L1 136 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TMEM102Q8N9M5 508 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 IL17RCQ8NAC3 791 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ADCY4Q8NFM4 1077 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SLCO4A1Q96BD0 722 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 KCTD14Q9BQ13 255 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 COPS7BQ9H9Q2 264 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms