RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 FKBP9O95302 570 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 DLGAP3O95886 979 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 MSL3P1P0C860 447 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 STMN1P16949 149 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 IMPA1P29218 277 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 GABRA4P48169 554 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 YBX1P67809 324 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TSTA3Q13630 321 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 FCRL6Q6DN72 434 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 FIGLAQ6QHK4 219 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 MBOAT1Q6ZNC8 495 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 DNAJC22Q8N4W6 341 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 OR2L3Q8NG85 312 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 OR8K5Q8NH50 307 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 OR1L3Q8NH93 324 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ANKRD7Q92527 254 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 NKD1Q969G9 470 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ACAT2Q9BWD1 397 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ULBP3Q9BZM4 244 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 WDR70Q9NW82 654 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 STOX2Q9P2F5 926 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 SSUH2Q9Y2M2 353 aa20.2■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ACACAQ13085 2346 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TMEM150CB9EJG8 249 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 CDC7O00311 574 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 HIST1H2AGP0C0S8 130 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 HIST1H2ADP20671 130 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 RPA3P35244 121 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 GRIA3P42263 894 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ZKSCAN8Q15776 578 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 UHMK1Q8TAS1 419 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ZUFSPQ96AP4 578 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 HIST1H2AHQ96KK5 128 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 HIST1H2AJQ99878 128 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 H2AFJQ9BTM1 129 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 FANCEQ9HB96 536 aa20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 INTS7Q9NVH2 962 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TEX51A0A1B0GUA7 166 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 NPEPPSL1A6NEC2 478 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 CMPK1P30085 196 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 RAB10P61026 200 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 UAP1Q16222 522 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 COL28A1Q2UY09 1125 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 DEFB110Q30KQ9 67 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 PRAMEF17Q5VTA0 474 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 AGTRAPQ6RW13 159 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 SBSNQ6UWP8 590 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 GSPT2Q8IYD1 628 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 CACNA2D3Q8IZS8 1091 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 NLGN4XQ8N0W4 816 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 SPATA6LQ8N4H0 392 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 EIF1ADQ8N9N8 165 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 NLGN4YQ8NFZ3 816 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TRIM54Q9BYV2 358 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TXLNGYQ9BZA5 131 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 UNKQ9C0B0 810 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ABCF3Q9NUQ8 709 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TAC3Q9UHF0 121 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 SERTAD3Q9UJW9 196 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 NOVA2Q9UNW9 492 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 KLK4Q9Y5K2 254 aa20.18■□□□□ 0.82
MAP1LC3A-202ENST00000374837 HMX2A2RU54 273 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TARM1B6A8C7 271 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 NTRK1P04629 796 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ENO2P09104 434 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 CCDC166P0CW27 439 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 MYBL2P10244 700 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ATP1A2P50993 1020 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 PMS2P54278 862 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 PRDX1Q06830 199 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 SRSF6Q13247 344 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 BMPR2Q13873 1038 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 MROH9Q5TGP6 573 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 BROXQ5VW32 411 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 C6orf15Q6UXA7 325 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TRMT10CQ7L0Y3 403 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 CMC1Q7Z7K0 106 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 VASH2Q86V25 355 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 TMEM126BQ8IUX1 230 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 GALNT6Q8NCL4 622 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 SLC44A1Q8WWI5 657 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 DERL2Q9GZP9 239 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ATG10Q9H0Y0 220 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 MRPS30Q9NP92 439 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ARL15Q9NXU5 204 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 CTNNAL1Q9UBT7 734 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 PLCL2Q9UPR0 1127 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 LOC400499M0QZD8 3231 aa20.17■□□□□ 0.82
MAP1LC3A-202ENST00000374837 A0A087WUV0 522 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 EFSO43281 561 aa20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 SCRG1O75711 98 aa20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 SLU7O95391 586 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ZIC2O95409 532 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 CTSBP07858 339 aa20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 CRABP2P29373 138 aa20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 GMPRP36959 345 aa20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 ITGA1P56199 1179 aa20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 AP1S2P56377 157 aa20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 NAE1Q13564 534 aa20.16■□□□□ 0.82
MAP1LC3A-202ENST00000374837 MAP7Q14244 749 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms