RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 OR5AR1Q8NGP9 310 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 PLCD4Q9BRC7 762 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 THAP1Q9NVV9 213 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 LNPEPQ9UIQ6 1025 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 KCNK6Q9Y257 313 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CCL27Q9Y4X3 112 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 GMEB1Q9Y692 573 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 BLACEA4D250 179 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 STK16O75716 305 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ESRRBO95718 433 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CEACAM1P13688 526 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 JUPP14923 745 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 HHEXQ03014 270 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ATG16L1Q676U5 607 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SPESP1Q6UW49 350 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CAPN12Q6ZSI9 719 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 OOSP2Q86WS3 158 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SORT1Q99523 831 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SLC17A7Q9P2U7 560 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SNX7Q9UNH6 387 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 A0A1W2PQ72 361 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SIGLEC6O43699 453 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CXCR2P25025 360 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 AK4P27144 223 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 IL9RQ01113 521 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 HSPA14Q0VDF9 509 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 EIF3IQ13347 325 aaKnown RBP10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 DOK6Q6PKX4 331 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 NXPE4Q6UWF7 544 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 RAB44Q7Z6P3 723 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 DCBLD1Q8N8Z6 715 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 TCTN2Q96GX1 697 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 TMEM237Q96Q45 408 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 EML4Q9HC35 981 aaKnown RBP10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CCDC177Q9NQR7 707 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 AP1M2Q9Y6Q5 423 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ATG2BQ96BY7 2078 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 PTPRBP23467 1997 aa10.77□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ZNF195O14628 629 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 B4GAT1O43505 415 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 UBXN7O94888 489 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 LDOC1O95751 146 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 OTCP00480 354 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 S100BP04271 92 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 PWP1Q13610 501 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 GARNL3Q5VVW2 1013 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 OR2L3Q8NG85 312 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CXorf40BQ96DE9 158 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 EDEM2Q9BV94 578 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ALG9Q9H6U8 611 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 IL21RQ9HBE5 538 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 RAP2CQ9Y3L5 183 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 NUMA1Q14980 2115 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 BDP1A6H8Y1 2624 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CACNA1EQ15878 2313 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 IGKV1-8A0A0C4DH67 115 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SLC22A2O15244 555 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 VPS4BO75351 444 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 DXOO77932 396 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 VIPP01282 170 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 MDH1P40925 334 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SLCO1A2P46721 670 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ATP4BP51164 291 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 BNIP3Q12983 259 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ICE2Q659A1 982 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 THOC6Q86W42 341 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 REPS1Q96D71 796 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 LRRN3Q9H3W5 708 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 DKK4Q9UBT3 224 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 PCDHGA3Q9Y5H0 932 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ATXN2Q99700 1313 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 TXNDC9O14530 226 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SLC16A8O95907 504 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 RECKO95980 971 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CREB1P16220 341 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 HPDP32754 393 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CUL3Q13618 768 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SMAD1Q15797 465 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 OGFOD2Q6N063 350 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 GOLGA7Q7Z5G4 137 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 PLXDC1Q8IUK5 500 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ZDHHC12Q96GR4 267 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ZPBPQ9BS86 351 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SPRY4Q9C004 299 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 MIR1-1HGQ9H1L0 117 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 DLL3Q9NYJ7 618 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 NKIRAS1Q9NYS0 192 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 ACTR10Q9NZ32 417 aa10.76□□□□□ -0.69
CSGALNACT2-201ENST00000374466 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 PCDH17O14917 1159 aa10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 DUX1O43812 170 aa10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 SRPX2O60687 465 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CLEC3AO75596 197 aa10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 C1GALT1C1LP0DN25 315 aa10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 RPS15AP62244 130 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 TRA2BP62995 288 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 PRAMEF14Q5SWL7 426 aa10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 PRAMEF13Q5VWM6 474 aa10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 CES4AQ5XG92 561 aa10.75□□□□□ -0.69
CSGALNACT2-201ENST00000374466 GALNT18Q6P9A2 607 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms