RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 DNAJA1P31689 397 aaKnown RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 GNG2P59768 71 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 ARHGAP1Q07960 439 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 CES5AQ6NT32 575 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 ZCCHC12Q6PEW1 402 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 FRRS1Q6ZNA5 592 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 TMEM126BQ8IUX1 230 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 IGDCC3Q8IVU1 814 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 CPA6Q8N4T0 437 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 BRINP2Q9C0B6 783 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 SNTG1Q9NSN8 517 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 SLC2A6Q9UGQ3 507 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 PPIEQ9UNP9 301 aaKnown RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 KCNIP3Q9Y2W7 256 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 FAM189A1O60320 539 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 BCAS2O75934 225 aaPredicted RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 POU2F1P14859 743 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 KELP23276 732 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 CMPK1P30085 196 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 KHKP50053 298 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 COLEC12Q5KU26 742 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 IDNKQ5T6J7 187 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 PDE12Q6L8Q7 609 aaKnown RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 HIPK3Q9H422 1215 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 RPL36Q9Y3U8 105 aaKnown RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 MAB21L2Q9Y586 359 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 COLEC10Q9Y6Z7 277 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 ILVBLA1L0T0 632 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 ANXA2P2A6NMY6 339 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 XKRYO14609 159 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 ANXA2P07355 339 aaKnown RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 RGS8P57771 180 aaPredicted RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 CLIP4Q8N3C7 705 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 LMO3Q8TAP4 145 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 TMBIM1Q969X1 311 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 C12orf43Q96C57 262 aaKnown RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 DLDP09622 509 aaKnown RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 ZBTB48P10074 688 aaPredicted RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 CKMT2P17540 419 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 CCNFP41002 786 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 ATP4BP51164 291 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 GSCP56915 257 aaPredicted RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 SCARB2Q14108 478 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 TIGD6Q17RP2 521 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 ZNF829Q3KNS6 432 aaPredicted RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 SFT2D3Q587I9 215 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 CREB3L1Q96BA8 519 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 ZNF471Q9BX82 626 aaPredicted RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 PCBD2Q9H0N5 130 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 OSER1Q9NX31 292 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 TMEM9Q9P0T7 183 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 MTRRQ9UBK8 725 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 PDPK1O15530 556 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 SIX3O95343 332 aaPredicted RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 IDSP22304 550 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 GALNT2Q10471 571 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 HEPACAMQ14CZ8 416 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 GALNTL5Q7Z4T8 443 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 CEP295NLQ96MC4 621 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 PFDN5Q99471 154 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 HTATIP2Q9BUP3 242 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 WRAP53Q9BUR4 548 aaKnown RBP13.89□□□□□ -0.19
LMX1B-202ENST00000373474 CDH7Q9ULB5 785 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 TMEM5Q9Y2B1 443 aa13.89□□□□□ -0.19
LMX1B-202ENST00000373474 OR7A10O76100 309 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 CD36P16671 472 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 SLC15A1P46059 708 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 DNAJB13P59910 316 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 TMEM220Q6QAJ8 160 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 OXR1Q8N573 874 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ZNF563Q8TA94 476 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 THAP6Q8TBB0 222 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 MAFIPQ8WZ33 124 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 DNASE1L2Q92874 299 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 CGREF1Q99674 301 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ACTR3BQ9P1U1 418 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 L7N2F9 121 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 OR1F1O43749 312 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 F8A1P23610 371 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 AFF1P51825 1210 aaKnown RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 INCA1Q0VD86 236 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ZNF155Q12901 538 aaPredicted RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 OGFRL1Q5TC84 451 aaPredicted RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ERMP1Q7Z2K6 904 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 SMG8Q8ND04 991 aaKnown RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 SLC35G5Q96KT7 338 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 KCTD7Q96MP8 289 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 MINDY3Q9H8M7 445 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 GDAP2Q9NXN4 497 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 CPQQ9Y646 472 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 A0A1B0GVC2 190 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 C9IYK1 514 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 TOR1BO14657 336 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 FANCGO15287 622 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 NIPSNAP2O75323 286 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ANXA8P13928 327 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 PRPS1L1P21108 318 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms