RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 IFRD1O00458 451 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 BNIP3LO60238 219 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 B4GALT3O60512 393 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 RETP07949 1114 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 POU2F1P14859 743 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 EPB42P16452 691 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 TNFRSF1BP20333 461 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 HOXD9P28356 352 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 CLCN7P51798 805 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 FAM171A1Q5VUB5 890 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 BRI3BPQ8WY22 251 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 PEX13Q92968 403 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 CEP19Q96LK0 163 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 CEP44Q9C0F1 390 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 EXOSC4Q9NPD3 245 aaKnown RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 ERVK13-1Q9NX77 482 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 THUMPD1Q9NXG2 353 aaKnown RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 TAS2R16Q9NYV7 291 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 PRRC2BQ5JSZ5 2229 aaKnown RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 NUAK1O60285 661 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 MAD2L1Q13257 205 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 DMC1Q14565 340 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 ATXN7L2Q5T6C5 722 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 KIAA1614Q5VZ46 1190 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 CCDC71Q8IV32 467 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 SLC38A4Q969I6 547 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 ZNF486Q96H40 463 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-202ENST00000373382 HSH2DQ96JZ2 352 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 ELOVL6Q9H5J4 265 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 KLHL3Q9UH77 587 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 SNX6Q9UNH7 406 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 TESMINQ9Y4I5 508 aa17.3■□□□□ 0.36
VPS26A-202ENST00000373382 AGAP5A6NIR3 686 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 PDZK1P1A8MUH7 402 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 TFECO14948 347 aaPredicted RBP17.29■□□□□ 0.36
VPS26A-202ENST00000373382 SLC6A4P31645 630 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 RGS4P49798 205 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 IL18R1Q13478 541 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 CYP27C1Q4G0S4 372 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 ZNF551Q7Z340 670 aaPredicted RBP17.29■□□□□ 0.36
VPS26A-202ENST00000373382 METTL4Q8N3J2 472 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 PARP16Q8N5Y8 322 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 AMER2Q8N7J2 671 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 SPPL2AQ8TCT8 520 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 RERGLQ9H628 205 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 CLMPQ9H6B4 373 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 ASB8Q9H765 288 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 SAMD4AQ9UPU9 718 aaKnown RBP17.29■□□□□ 0.36
VPS26A-202ENST00000373382 SLC28A1O00337 649 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 MANBAO00462 879 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 IDH3BO43837 385 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 ESR1P03372 595 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 RHOCP08134 193 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 AZGP1P25311 298 aaKnown RBP17.29■□□□□ 0.36
VPS26A-202ENST00000373382 CTSKP43235 329 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 CRISP3P54108 245 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 PCBP2Q15366 365 aaKnown RBP eCLIP17.29■□□□□ 0.36
VPS26A-202ENST00000373382 RGMBQ6NW40 437 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 SERPINA9Q86WD7 417 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 SLX1AQ9BQ83 275 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 TTPALQ9BTX7 342 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 NUAK2Q9H093 628 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 QPCTLQ9NXS2 382 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 GPR83Q9NYM4 423 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 FNIP2Q9P278 1114 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 DHRS7Q9Y394 339 aa17.29■□□□□ 0.36
VPS26A-202ENST00000373382 PDYNP01213 254 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 APOA1P02647 267 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 OPN1SWP03999 348 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 STSP08842 583 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 ITGAMP11215 1152 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 ENGP17813 658 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 DNAJA1P31689 397 aaKnown RBP17.28■□□□□ 0.36
VPS26A-202ENST00000373382 CA5AP35218 305 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 PTGER3P43115 390 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 IFITM2Q01629 132 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 NPRL3Q12980 569 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 CTXN3Q4LDR2 81 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 USP39Q53GS9 565 aaKnown RBP17.28■□□□□ 0.36
VPS26A-202ENST00000373382 STX19Q8N4C7 294 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 SUSD3Q96L08 255 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 PSKH2Q96QS6 385 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 CPPED1Q9BRF8 314 aaPredicted RBP17.28■□□□□ 0.36
VPS26A-202ENST00000373382 ADGRE3Q9BY15 652 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 HOXD1Q9GZZ0 328 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 CPNE5Q9HCH3 593 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 OSGIN1Q9UJX0 560 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 CCL27Q9Y4X3 112 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 PRSS21Q9Y6M0 314 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 OR2A25A4D2G3 310 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 GRXCR2A6NFK2 248 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 M0QZQ0 153 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 TAF4O00268 1085 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 PRAMEF1O95521 474 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 HOXA9P31269 272 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 GRK5P34947 590 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 TGFBR2P37173 567 aa17.28■□□□□ 0.36
VPS26A-202ENST00000373382 MRPL19P49406 292 aaKnown RBP17.28■□□□□ 0.36
VPS26A-202ENST00000373382 CAMK2GQ13555 558 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms