RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 DNAL1Q4LDG9 190 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 THEMIS2Q5TEJ8 643 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 GRHL2Q6ISB3 625 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 DUS1LQ6P1R4 473 aaKnown RBP25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 ABRAXAS1Q6UWZ7 409 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 LPCAT2Q7L5N7 544 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 SLC22A18ASQ8N1D0 253 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 NEIL2Q969S2 332 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 IL17FQ96PD4 163 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 ORAI3Q9BRQ5 295 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 HAUS8Q9BT25 410 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 TMEM168Q9H0V1 697 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 SDR39U1Q9NRG7 319 aaPredicted RBP25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 PCOLCE2Q9UKZ9 415 aa25.46■■□□□ 1.67
ATPAF1-202ENST00000371937 SERTM1A2A2V5 107 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 KDM1AO60341 852 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 PDYNP01213 254 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 DCNP07585 359 aaKnown RBP25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 CD27P26842 260 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 MRPL19P49406 292 aaKnown RBP25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 EMX2Q04743 252 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 RPE65Q16518 533 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 AP5B1Q2VPB7 878 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 AGKQ53H12 422 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 SUSD1Q6UWL2 747 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 LCTLQ6UWM7 567 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 SLCO4C1Q6ZQN7 724 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 SPACA7Q96KW9 195 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 CAMK1GQ96NX5 476 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 RAB11FIP5Q9BXF6 653 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 PCBD2Q9H0N5 130 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 EHD1Q9H4M9 534 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 GPR27Q9NS67 375 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 AIG1Q9NVV5 245 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 COLEC10Q9Y6Z7 277 aa25.45■■□□□ 1.66
ATPAF1-202ENST00000371937 SPTY2D1-AS1A0A0U1RR47 76 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 H0YIV9 168 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 GPX3P22352 226 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 MAD2L1Q13257 205 aaPredicted RBP25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 PRAMEF14Q5SWL7 426 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 PRAMEF13Q5VWM6 474 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 DCP2Q8IU60 420 aaKnown RBP25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 SMPDL3AQ92484 453 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 MTFMTQ96DP5 389 aaKnown RBP25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 KLHDC7BQ96G42 594 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 MENTQ9BUN1 341 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 AASDHPPTQ9NRN7 309 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 CCDC167Q9P0B6 97 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 TBC1D29Q9UFV1 150 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 PNMA8BQ9ULN7 279 aaPredicted RBP25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 PCDHGA11Q9Y5H2 935 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 GPR45Q9Y5Y3 372 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 OR52A4PA6NMU1 304 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 GSC2O15499 205 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 MTHFD1P11586 935 aaKnown RBP25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 CD22P20273 847 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 ACTR1BP42025 376 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 ACTR1AP61163 376 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 ILF3Q12906 894 aaKnown RBP eCLIP25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 ATG9BQ674R7 924 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 SLC5A11Q8WWX8 675 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 MCUR1Q96AQ8 359 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 WDR34Q96EX3 536 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 EFCAB11Q9BUY7 163 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 BRINP2Q9C0B6 783 aa25.44■■□□□ 1.66
ATPAF1-202ENST00000371937 AXIN1O15169 862 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 KRT16P08779 473 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 AK4P27144 223 aaPredicted RBP25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 NDUFS1P28331 727 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 MAGEA9P43362 315 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 DIO3P55073 304 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 STX5Q13190 355 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 CUL3Q13618 768 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 USP39Q53GS9 565 aaKnown RBP25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 PAGE2BQ5JRK9 111 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 SLC36A4Q6YBV0 504 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 TMPRSS11BQ86T26 416 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 LONP2Q86WA8 852 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 ARHGAP24Q8N264 748 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 FBXO27Q8NI29 283 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 HMGCLL1Q8TB92 370 aa25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 CADM1Q9BY67 442 aaKnown RBP25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 NOP53Q9NZM5 478 aaKnown RBP25.43■■□□□ 1.66
ATPAF1-202ENST00000371937 C1GALT1C1LP0DN25 315 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 RAB28P51157 221 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 ZXDAP98168 799 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 HMGCS1Q01581 520 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 RPL6Q02878 288 aaKnown RBP25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 PAOXQ6QHF9 649 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 MAMSTRQ6ZN01 415 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 SH3KBP1Q96B97 665 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 REPS1Q96D71 796 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 SLC6A18Q96N87 628 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 SLC25A23Q9BV35 468 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 LRTM1Q9HBL6 345 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 TMEM45AQ9NWC5 275 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 INVSQ9Y283 1065 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 SNRPB2P08579 225 aaKnown RBP25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 SLC2A4P14672 509 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 CPOXP36551 454 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms