RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 WDR34Q96EX3 536 aa16.98■□□□□ 0.31
SSBP3-203ENST00000371319 BMFQ96LC9 184 aa16.98■□□□□ 0.31
SSBP3-203ENST00000371319 RNPEPL1Q9HAU8 725 aa16.98■□□□□ 0.31
SSBP3-203ENST00000371319 FGF22Q9HCT0 170 aa16.98■□□□□ 0.31
SSBP3-203ENST00000371319 C2orf42Q9NWW7 574 aa16.98■□□□□ 0.31
SSBP3-203ENST00000371319 PACSIN3Q9UKS6 424 aa16.98■□□□□ 0.31
SSBP3-203ENST00000371319 KCNK6Q9Y257 313 aa16.98■□□□□ 0.31
SSBP3-203ENST00000371319 CFAP20Q9Y6A4 193 aaKnown RBP16.98■□□□□ 0.31
SSBP3-203ENST00000371319 H0YIV9 168 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 IFRD1O00458 451 aaPredicted RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 FPGTO14772 594 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 LATO43561 262 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 KCNJ13O60928 360 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 SEC22BO75396 215 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 SLC35G4P0C7Q5 338 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 HNRNPA2B1P22626 353 aaKnown RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 CCND1P24385 295 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 VARSP26640 1264 aaKnown RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 RPL10P27635 214 aaKnown RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 HNF4AP41235 474 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 DGKEP52429 567 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 POLR2JP52435 117 aaKnown RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 ZNF33BQ06732 778 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 MAD2L1Q13257 205 aaPredicted RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 CEACAM7Q14002 265 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 NFATC4Q14934 902 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 ZNF423Q2M1K9 1284 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 COQ5Q5HYK3 327 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 TPRG1LQ5T0D9 272 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 C6orf163Q5TEZ5 329 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 C1orf146Q5VVC0 180 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 DUS1LQ6P1R4 473 aaKnown RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 GCNT7Q6ZNI0 430 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 RNF175Q8N4F7 328 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 ROPN1LQ96C74 230 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 SPDL1Q96EA4 605 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 CMTM7Q96FZ5 175 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 INSM2Q96T92 566 aaPredicted RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 EBF2Q9HAK2 575 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 LMAN1LQ9HAT1 526 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 MOSPD1Q9UJG1 213 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 EIF3LQ9Y262 564 aaKnown RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 TDRKHQ9Y2W6 561 aaKnown RBP16.97■□□□□ 0.31
SSBP3-203ENST00000371319 GPSM3Q9Y4H4 160 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 KCNE2Q9Y6J6 123 aa16.97■□□□□ 0.31
SSBP3-203ENST00000371319 PRSS38A1L453 326 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 H0Y8X5 98 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 KRT36O76013 467 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 SEMA4FO95754 770 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 RPN2P04844 631 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 GNAZP19086 355 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 THOP1P52888 689 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 KCNK10P57789 538 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 PRKCQQ04759 706 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 FZD5Q13467 585 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 TLR1Q15399 786 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 SUSD1Q6UWL2 747 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 LAYNQ6UX15 382 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 SYT13Q7L8C5 426 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 TBC1D21Q8IYX1 336 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 PGBD3Q8N328 593 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 ENDOVQ8N8Q3 282 aaKnown RBP16.96■□□□□ 0.31
SSBP3-203ENST00000371319 OR1E3Q8WZA6 343 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 SERPINI1Q99574 410 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 NRTNQ99748 197 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 MENTQ9BUN1 341 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 TRIT1Q9H3H1 467 aaKnown RBP16.96■□□□□ 0.31
SSBP3-203ENST00000371319 OSGEPL1Q9H4B0 414 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 CCDC177Q9NQR7 707 aaPredicted RBP16.96■□□□□ 0.31
SSBP3-203ENST00000371319 CROTQ9UKG9 612 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 POMPQ9Y244 141 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 DYRK1BQ9Y463 629 aa16.96■□□□□ 0.31
SSBP3-203ENST00000371319 A0A1W2PP18 115 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 ANGPT2O15123 496 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 EEDO75530 441 aaKnown RBP16.95■□□□□ 0.3
SSBP3-203ENST00000371319 PSMG1O95456 288 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 APBB3O95704 486 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 LMNAP02545 664 aaKnown RBP16.95■□□□□ 0.3
SSBP3-203ENST00000371319 JAK1P23458 1154 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 CSTF3Q12996 717 aaKnown RBP16.95■□□□□ 0.3
SSBP3-203ENST00000371319 PRKG2Q13237 762 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 CCNIQ14094 377 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 LRRC32Q14392 662 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 GAS6Q14393 721 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 CYP2A13Q16696 494 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 USP39Q53GS9 565 aaKnown RBP16.95■□□□□ 0.3
SSBP3-203ENST00000371319 CATSPEREQ5SY80 951 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 ATG9BQ674R7 924 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 LCTLQ6UWM7 567 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 TMPRSS11BQ86T26 416 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 SYNPOQ8N3V7 929 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 LIX1Q8N485 282 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 PCYOX1LQ8NBM8 494 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 SETD7Q8WTS6 366 aaKnown RBP16.95■□□□□ 0.3
SSBP3-203ENST00000371319 VPS33AQ96AX1 596 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 CCDC124Q96CT7 223 aaKnown RBP16.95■□□□□ 0.3
SSBP3-203ENST00000371319 C12orf66Q96MD2 445 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 OR2M4Q96R27 311 aa16.95■□□□□ 0.3
SSBP3-203ENST00000371319 GPATCH1Q9BRR8 931 aaKnown RBP16.95■□□□□ 0.3
SSBP3-203ENST00000371319 C6orf106Q9H6K1 298 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms