RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 HMBOX1Q6NT76 420 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 PPP4R4Q6NUP7 873 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 CYP2R1Q6VVX0 501 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 ZBTB49Q6ZSB9 765 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 NPAS3Q8IXF0 933 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 HCAR2Q8TDS4 363 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 WFIKKN2Q8TEU8 576 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 SLCO4A1Q96BD0 722 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 POLR1BQ9H9Y6 1135 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 SLAMF8Q9P0V8 285 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 SNX13Q9Y5W8 968 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 TCRBV3S1A0A5B6 114 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 KRT87PA6NCN2 255 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 GFYI3L273 518 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 C8GP07360 202 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 ENO2P09104 434 aaPredicted RBP12.47□□□□□ -0.41
GPC3-201ENST00000370818 AAK1Q2M2I8 961 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 PRMT9Q6P2P2 845 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 LIPIQ6XZB0 460 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 RNF165Q6ZSG1 346 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 ZFAND4Q86XD8 727 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 VN1R2Q8NFZ6 395 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 NUDT8Q8WV74 236 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
GPC3-201ENST00000370818 ASB16Q96NS5 453 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 ZSCAN5AQ9BUG6 496 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 CERS4Q9HA82 394 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 TMEM45AQ9NWC5 275 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 TRPS1Q9UHF7 1281 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 FAM234BA2RU67 622 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 TMEM202A6NGA9 273 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 CCDC154A6NI56 674 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 OR2AG2A6NM03 316 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 A8MU76 341 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 DLGAP1O14490 977 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 SOCS2O14508 198 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 SPINT1O43278 529 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 MYO1DO94832 1006 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 PAPLNO95428 1278 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 MPC1LP0DKB6 136 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 CCNA2P20248 432 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 MSH3P20585 1137 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 MYF6P23409 242 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 GRIA3P42263 894 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 FOXM1Q08050 763 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 FAM209AQ5JX71 171 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 AGAP7PQ5VUJ5 663 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 CYP20A1Q6UW02 462 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 CYP2U1Q7Z449 544 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 TRIM46Q7Z4K8 759 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 BTLAQ7Z6A9 289 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 SFTPA1Q8IWL2 248 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 KIAA1958Q8N8K9 716 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 BPIFB1Q8TDL5 484 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 UHRF1Q96T88 793 aaPredicted RBP12.46□□□□□ -0.41
GPC3-201ENST00000370818 P2RY13Q9BPV8 354 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 SLC32A1Q9H598 525 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 TMEM9Q9P0T7 183 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 KLQ9UEF7 1012 aa12.46□□□□□ -0.41
GPC3-201ENST00000370818 PLXNA2O75051 1894 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 ULK1O75385 1050 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 JRKO75564 520 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 CLPXO76031 633 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 AP2A2O94973 939 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 HLA-EP13747 358 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 HSD17B1P14061 328 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 XPAP23025 273 aaPredicted RBP12.46□□□□□ -0.42
GPC3-201ENST00000370818 HNRNPFP52597 415 aaKnown RBP12.46□□□□□ -0.42
GPC3-201ENST00000370818 HMGCS1Q01581 520 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 IFITM2Q01629 132 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 PRKCQQ04759 706 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 PRKG2Q13237 762 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 NFYCQ13952 458 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 RABL3Q5HYI8 236 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 HABP4Q5JVS0 413 aaKnown RBP12.46□□□□□ -0.42
GPC3-201ENST00000370818 DHFR2Q86XF0 187 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 RASGRP3Q8IV61 690 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 KIAA2013Q8IYS2 634 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 TNIP2Q8NFZ5 429 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 DNAJB14Q8TBM8 379 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 BTN2A2Q8WVV5 523 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 ELMO1Q92556 727 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 USP7Q93009 1102 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 TMEM125Q96AQ2 219 aa12.46□□□□□ -0.42
GPC3-201ENST00000370818 POLR3HQ9Y535 204 aaPredicted RBP12.46□□□□□ -0.42
GPC3-201ENST00000370818 MANBAO00462 879 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 KPNA3O00505 521 aaPredicted RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 SEC24DO94855 1032 aaPredicted RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 WDR47O94967 919 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 BCL10O95999 233 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 ELFN1P0C7U0 828 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 ATP6V1B2P21281 511 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 MATN1P21941 496 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 MAP4P27816 1152 aaKnown RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 IDUAP35475 653 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 SLC6A12P48065 614 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 NRIP1P48552 1158 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 CTSCP53634 463 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms