RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 PRAMEF13Q5VWM6 474 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 EMBQ6PCB8 327 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 OR2L3Q8NG85 312 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 FGF11Q92914 225 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 EXT2Q93063 718 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 ALKBH8Q96BT7 664 aaKnown RBP14.3□□□□□ -0.12
COL9A1-204ENST00000370496 TCTN2Q96GX1 697 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 EGFL8Q99944 293 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 CCDC77Q9BR77 488 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 ZPBPQ9BS86 351 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 TWSG1Q9GZX9 223 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 EPB41L4BQ9H329 900 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 FGF21Q9NSA1 209 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 WDR70Q9NW82 654 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 PSMC3IPQ9P2W1 217 aaPredicted RBP14.3□□□□□ -0.12
COL9A1-204ENST00000370496 RARRES3Q9UL19 164 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 NOVA2Q9UNW9 492 aaKnown RBP14.3□□□□□ -0.12
COL9A1-204ENST00000370496 OARD1Q9Y530 152 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 PCDHGA3Q9Y5H0 932 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 A0A096LPK6 155 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 HMX2A2RU54 273 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 TRIM49D1C9J1S8 452 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 E7ENX8 843 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 ALDOAP04075 364 aaKnown RBP14.29□□□□□ -0.12
COL9A1-204ENST00000370496 LTA4HP09960 611 aaKnown RBP14.29□□□□□ -0.12
COL9A1-204ENST00000370496 CD1DP15813 335 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 TAP2Q03519 686 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 IL11RAQ14626 422 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 DEFB110Q30KQ9 67 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 LGSNQ5TDP6 509 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 KIAA1614Q5VZ46 1190 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 AGTRAPQ6RW13 159 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 PPP1R3BQ86XI6 285 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 PROSER1Q86XN7 944 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 SNIP1Q8TAD8 396 aaKnown RBP14.29□□□□□ -0.12
COL9A1-204ENST00000370496 AENQ8WTP8 325 aaKnown RBP14.29□□□□□ -0.12
COL9A1-204ENST00000370496 ATL1Q8WXF7 558 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 DCBLD2Q96PD2 775 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 B3GNT4Q9C0J1 378 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 MRPS30Q9NP92 439 aaKnown RBP14.29□□□□□ -0.12
COL9A1-204ENST00000370496 KLHL20Q9Y2M5 609 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 ACOT9Q9Y305 439 aa14.29□□□□□ -0.12
COL9A1-204ENST00000370496 NCF1BA6NI72 391 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 NCF1CA8MVU1 366 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 TMEM150CB9EJG8 249 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 STMND1H3BQB6 276 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 TLX3O43711 291 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 PRICKLE3O43900 615 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 S100BP04271 92 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 C2P06681 752 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 ANXA5P08758 320 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 NCF1P14598 390 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 CCND1P24385 295 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 CD82P27701 267 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 GMPRP36959 345 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 IRF9Q00978 393 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 FAM83EQ2M2I3 478 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 ICE2Q659A1 982 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 CAPN13Q6MZZ7 669 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 KLC3Q6P597 504 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 CDHR3Q6ZTQ4 885 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 ADCK2Q7Z695 626 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 KDF1Q8NAX2 398 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 ZNF248Q8NDW4 579 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 OR2A1Q8NGT9 310 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 OR8K5Q8NH50 307 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 KCTD4Q8WVF5 259 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 KCNE4Q8WWG9 221 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 FBXL8Q96CD0 374 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 NAF1Q96HR8 494 aaKnown RBP14.28□□□□□ -0.12
COL9A1-204ENST00000370496 UBXN10Q96LJ8 280 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 TSNARE1Q96NA8 513 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 DHRS4Q9BTZ2 278 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 PARD6BQ9BYG5 372 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 ULBP3Q9BZM4 244 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 PCBD2Q9H0N5 130 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 ATG10Q9H0Y0 220 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 VPS11Q9H270 941 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 NMRAL1Q9HBL8 299 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 IRAK4Q9NWZ3 460 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 FETUBQ9UGM5 382 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 RNF112Q9ULX5 631 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 RAXQ9Y2V3 346 aa14.28□□□□□ -0.12
COL9A1-204ENST00000370496 SDK2Q58EX2 2172 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 ACACBO00763 2458 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 IQANK1A0A1B0GTG1 560 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 SMIM23A6NLE4 172 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 SNRPAP09012 282 aaKnown RBP14.27□□□□□ -0.12
COL9A1-204ENST00000370496 FGF5P12034 268 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 TFEBP19484 476 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 HSD17B3P37058 310 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 SLC26A3P40879 764 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 NAE1Q13564 534 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 TGFBIQ15582 683 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 OR4D1Q15615 310 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 ZIC1Q15915 447 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 FIGLAQ6QHK4 219 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 GPSM1Q86YR5 675 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 TMEM126BQ8IUX1 230 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 ISL2Q96A47 359 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms