RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SYTL1Q8IYJ3 562 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 SCAMP5Q8TAC9 235 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 CD200R1Q8TD46 325 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 NUDT8Q8WV74 236 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 ESAMQ96AP7 390 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 LINGO1Q96FE5 620 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 ZFP42Q96MM3 310 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 RAD9AQ99638 391 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 BARD1Q99728 777 aaKnown RBP16.98■□□□□ 0.31
CHTOP-203ENST00000368690 NUAK2Q9H093 628 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 FAM105AQ9NUU6 356 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 EHD3Q9NZN3 535 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 AASSQ9UDR5 926 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 TLR6Q9Y2C9 796 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 ARVCFO00192 962 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 WDR47O94967 919 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 SEMG1P04279 462 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 DBTP11182 482 aaKnown RBP16.98■□□□□ 0.31
CHTOP-203ENST00000368690 CKBP12277 381 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 PCSK2P16519 638 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 CLCNKBP51801 687 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 PTGR1Q14914 329 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 SPANXN2Q5MJ10 180 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 ALG1LQ6GMV1 187 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 SCD5Q86SK9 330 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 CCDC190Q86UF4 302 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 CCDC71Q8IV32 467 aaPredicted RBP16.98■□□□□ 0.31
CHTOP-203ENST00000368690 TMEM132CQ8N3T6 1108 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 DCBLD1Q8N8Z6 715 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 EEF1AKMT1Q8WVE0 214 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 APH1BQ8WW43 257 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 KCNJ9Q92806 393 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 SLC39A13Q96H72 371 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 OR52E6Q96RD3 313 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 COPS4Q9BT78 406 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 CEP44Q9C0F1 390 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 PAK6Q9NQU5 681 aaPredicted RBP16.98■□□□□ 0.31
CHTOP-203ENST00000368690 KRT84Q9NSB2 600 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 FKBP14Q9NWM8 211 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 PSORS1C1Q9UIG5 152 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 LYVE1Q9Y5Y7 322 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 CAPN5O15484 640 aaPredicted RBP16.97■□□□□ 0.31
CHTOP-203ENST00000368690 CHRNB1P11230 501 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 HOXB9P17482 250 aaPredicted RBP16.97■□□□□ 0.31
CHTOP-203ENST00000368690 RPL9P32969 192 aaKnown RBP16.97■□□□□ 0.31
CHTOP-203ENST00000368690 UGT2B15P54855 530 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 TEKQ02763 1124 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 STARD3Q14849 445 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 SYT16Q17RD7 645 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 PARP15Q460N3 678 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 TRIM46Q7Z4K8 759 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 CELF2-AS1Q8N7Q2 184 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 GALNT6Q8NCL4 622 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 LPPQ93052 612 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 HRASLS5Q96KN8 279 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 TRIB3Q96RU7 358 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 GABARAPL3Q9BY60 117 aa16.97■□□□□ 0.31
CHTOP-203ENST00000368690 MKI67P46013 3256 aaKnown RBP16.97■□□□□ 0.31
CHTOP-203ENST00000368690 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 CENPXA8MT69 81 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 PCDHGA12O60330 932 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 PRSS56P0CW18 603 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 ODC1P11926 461 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 GNPDA1P46926 289 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 PXNP49023 591 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-203ENST00000368690 TTPAP49638 278 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 RPP38P78345 283 aaKnown RBP16.96■□□□□ 0.31
CHTOP-203ENST00000368690 NPRL3Q12980 569 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 SERINC3Q13530 473 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 GALNT3Q14435 633 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 TAF1AQ15573 450 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-203ENST00000368690 ZFP69Q49AA0 526 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 ERAP2Q6P179 960 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 TMC5Q6UXY8 1006 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 PHACTR4Q8IZ21 702 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 SIDT2Q8NBJ9 832 aaKnown RBP16.96■□□□□ 0.31
CHTOP-203ENST00000368690 TMCO6Q96DC7 493 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 RNF38Q9H0F5 515 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 PDP1Q9P0J1 537 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-203ENST00000368690 ABCG2Q9UNQ0 655 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 KLK4Q9Y5K2 254 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 ARL1P40616 181 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-203ENST00000368690 PIK3CBP42338 1070 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 ATN1P54259 1190 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-203ENST00000368690 OLR1P78380 273 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 CREMQ03060 361 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 GTF2H3Q13889 308 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 TRIM71Q2Q1W2 868 aaKnown RBP16.96■□□□□ 0.31
CHTOP-203ENST00000368690 PRSS36Q5K4E3 855 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 MILR1Q7Z6M3 343 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 ADAMTSL2Q86TH1 951 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 P3H2Q8IVL5 708 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 ENTHD1Q8IYW4 607 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 LIX1Q8N485 282 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 FLCNQ8NFG4 579 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 DNASE1L2Q92874 299 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 TNKS2Q9H2K2 1166 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 SLA2Q9H6Q3 261 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 KIF17Q9P2E2 1029 aa16.96■□□□□ 0.31
CHTOP-203ENST00000368690 RPS6KA6Q9UK32 745 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms