RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ALPK1Q96QP1 1244 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 CGREF1Q99674 301 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 GABARAPL1Q9H0R8 117 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 NT5MQ9NPB1 228 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 INIPQ9NRY2 104 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 NLE1Q9NVX2 485 aaPredicted RBP11.25□□□□□ -0.61
USF1-201ENST00000368019 FAM118AQ9NWS6 357 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 ASIC5Q9NY37 505 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
USF1-201ENST00000368019 NUDT4Q9NZJ9 180 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 PCTPQ9UKL6 214 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 ZNF840PA6NDX5 716 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 ZNF99A8MXY4 864 aaPredicted RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 G3V2T6 193 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 SYNCRIPO60506 623 aaKnown RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 BCAS1O75363 584 aaPredicted RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 RHOBTB1O94844 696 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 SIX3O95343 332 aaPredicted RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 CLIC3O95833 236 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 OLFM2O95897 454 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 MT-CO1P00395 513 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 CHRM3P20309 590 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 ACVR2AP27037 513 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 ELK4P28324 431 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 MAPKAPK2P49137 400 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 DIO3P55073 304 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 OR4D2P58180 307 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 SLC7A9P82251 487 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 DSC2Q02487 901 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 MAD2L1Q13257 205 aaPredicted RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 PCBP2Q15366 365 aaKnown RBP eCLIP11.24□□□□□ -0.61
USF1-201ENST00000368019 DGUOKQ16854 277 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 ZNF691Q5VV52 312 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 SULT1C3Q6IMI6 304 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 TCEAL6Q6IPX3 200 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 METTL2BQ6P1Q9 378 aaKnown RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 TBPL2Q6SJ96 375 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 SLC16A12Q6ZSM3 486 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 R3HCC1LQ7Z5L2 792 aaKnown RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 SYVN1Q86TM6 617 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 PIM3Q86V86 326 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 CLEC4FQ8N1N0 589 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 DTWD1Q8N5C7 304 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 ATP6V0D2Q8N8Y2 350 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 PROKR1Q8TCW9 393 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 PHF10Q8WUB8 498 aaKnown RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 TCEAL3Q969E4 200 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 PPP3R2Q96LZ3 170 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 FUNDC2Q9BWH2 189 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 POLR1EQ9GZS1 481 aaKnown RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 RNF38Q9H0F5 515 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 CCNB1IP1Q9NPC3 277 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 BAG5Q9UL15 447 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 TNPO3Q9Y5L0 923 aaKnown RBP11.24□□□□□ -0.61
USF1-201ENST00000368019 CORINQ9Y5Q5 1042 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 CHD5Q8TDI0 1954 aa11.24□□□□□ -0.61
USF1-201ENST00000368019 AKAP13Q12802 2813 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 C1orf232A0A0U1RR37 186 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 FAM92AA1XBS5 289 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 ISPDA4D126 451 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 DRGXA6NNA5 263 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 FAM220BPB1ANY3 271 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 H3BMM5 538 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 TMX2-CTNND1H3BSU7 103 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 LEFTY2O00292 366 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 SLC1A7O00341 560 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 TNFRSF10BO14763 440 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 AREL1O15033 823 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 ANKRD28O15084 1053 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 NDUFS2O75306 463 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 VPS26AO75436 327 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 WDR47O94967 919 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 KCNH1O95259 989 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 KCNK5O95279 499 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 NFATC1O95644 943 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 TFPTP0C1Z6 253 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 NCK1P16333 377 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 JUNDP17535 347 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 TSPAN8P19075 237 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 PCMT1P22061 227 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 UFM1P61960 85 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 SLC10A7Q0GE19 358 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 CDC20Q12834 499 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 SERINC3Q13530 473 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 KEAP1Q14145 624 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 PLCL1Q15111 1095 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 ATP6AP1LQ52LC2 224 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 PMS2CLQ68D20 193 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 TUBA3EQ6PEY2 450 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 CRTC3Q6UUV7 619 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 CYP2U1Q7Z449 544 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 STK32CQ86UX6 486 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 IFNEQ86WN2 208 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 HIPK1Q86Z02 1210 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 ADGRG2Q8IZP9 1017 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 LGI2Q8N0V4 545 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 SVOPQ8N4V2 548 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 PDZD8Q8NEN9 1154 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 FUBP1Q96AE4 644 aaKnown RBP11.23□□□□□ -0.61
USF1-201ENST00000368019 HMCESQ96FZ2 354 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms