RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 BCAS3Q9H6U6 928 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SPATA31A1Q5TZJ5 1347 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MRASO14807 208 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NPC1O15118 1278 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RAB36O95755 333 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ECHS1P30084 290 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BAG6P46379 1132 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ERVK-8P63133 956 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 EXOSC6Q5RKV6 272 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CES5AQ6NT32 575 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 LRRC28Q86X40 367 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC7A5P1Q8MH63 180 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 OR2D3Q8NGH3 330 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FEZF2Q8TBJ5 459 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TBCKQ8TEA7 893 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM176AQ96HP8 235 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FBXL18Q96ME1 805 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM120AQ9BXJ8 343 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TPT1P8Q9HAU6 139 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CLEC4AQ9UMR7 237 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC16A5O15375 505 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 KCNE1P15382 129 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ARR3P36575 388 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC11A2P49281 568 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ERVK-25P63136 954 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 KCNAB1Q14722 419 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 AP5B1Q2VPB7 878 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FBXO33Q7Z6M2 555 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 OR9K2Q8NGE7 335 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FOXRED1Q96CU9 486 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HEXIM2Q96MH2 286 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC2A13Q96QE2 648 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ERVK-6Q9BXR3 956 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PIDD1Q9HB75 910 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ERVK-18Q9QC07 812 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TRAPPC4Q9Y296 219 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ATRNL1Q5VV63 1379 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 INPPL1O15357 1258 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RAF1P04049 648 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FHP07954 510 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 YBEYP58557 167 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TLE3Q04726 772 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BTBD16Q32M84 506 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF484Q5JVG2 852 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 OR10T2Q8NGX3 314 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 JAM3Q9BX67 310 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MFFQ9GZY8 342 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 AGPAT3Q9NRZ7 376 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PCDHB7Q9Y5E2 793 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BICRAQ9NZM4 1560 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 GNA15P30679 374 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 IL31RAQ8NI17 732 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC22A18Q96BI1 424 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PGBD4Q96DM1 585 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 LRRC4CQ9HCJ2 640 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HEY2Q9UBP5 337 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ITGAMP11215 1152 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DUOXA1Q1HG43 343 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC29A4Q7RTT9 530 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RBM23Q86U06 439 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 OSTF1Q92882 214 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FAM117AQ9C073 453 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NCKAP1Q9Y2A7 1128 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ETV7Q9Y603 341 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DOK2O60496 412 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 GRAP2O75791 330 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HTR3BO95264 441 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ITPK1Q13572 414 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SHC4Q6S5L8 630 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 POMGNT2Q8NAT1 580 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 KLHL8Q9P2G9 620 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HYKKA2RU49 373 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RNF13O43567 381 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ETV5P41161 510 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 KLRC3Q07444 240 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ARMC12Q5T9G4 340 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 KIAA0930Q6ICG6 404 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ETV3LQ6ZN32 361 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 KCNG3Q8TAE7 436 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CLP1Q92989 425 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TAAR8Q969N4 342 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DHRS9Q9BPW9 319 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CD274Q9NZQ7 290 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TMPRSS11EQ9UL52 423 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SMCO3A2RU48 225 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CTSKP43235 329 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 VEZF1Q14119 521 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RNF130Q86XS8 419 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SLC34A3Q8N130 599 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ARL11Q969Q4 196 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM134Q9H6X4 195 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 LYARQ9NX58 379 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TREHO43280 583 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RCBTB2O95199 551 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PTBP3O95758 552 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CRYZL1O95825 349 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 IL7P13232 177 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CDK8P49336 464 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FCGRTP55899 365 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GPX6P59796 221 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms