RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SBSNQ6UWP8 590 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 CCDC80Q76M96 950 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 GPR149Q86SP6 731 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 STK40Q8N2I9 435 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 LKAAEAR1Q8TD35 194 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 HSH2DQ96JZ2 352 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 HIST1H2AHQ96KK5 128 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 Q96MT0 163 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 HIST1H2AJQ99878 128 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 H2AFJQ9BTM1 129 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 NUAK2Q9H093 628 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 ATG10Q9H0Y0 220 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 EHD3Q9NZN3 535 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 SCHIP1Q9P0W5 487 aaPredicted RBP7.98□□□□□ -1.13
CD46-208ENST00000367042 DHRS7Q9Y394 339 aa7.98□□□□□ -1.13
CD46-208ENST00000367042 PDZK1P1A8MUH7 402 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 CLIC1O00299 241 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 MANBAO00462 879 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 WDR47O94967 919 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 CLDN9O95484 217 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 PDYNP01213 254 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 ENGP17813 658 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 TNFRSF1BP20333 461 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 HOXD9P28356 352 aaPredicted RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 ATP5C1P36542 298 aaKnown RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 KIR3DL1P43629 444 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 RPIAP49247 311 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 FCGRTP55899 365 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 DEFA1P59665 94 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 DEFA3P59666 94 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 VLDLRP98155 873 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 SELENBP1Q13228 472 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 PLEKHG6Q3KR16 790 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 INO80DQ53TQ3 878 aaPredicted RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 KIAA1614Q5VZ46 1190 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 STEAP3Q658P3 488 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 DESI1Q6ICB0 168 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 GLB1L3Q8NCI6 653 aaPredicted RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 MGME1Q9BQP7 344 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 ITPAQ9BY32 194 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 MAGEH1Q9H213 219 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 IL37Q9NZH6 218 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 ANKMY1Q9P2S6 941 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 OGDHLQ9ULD0 1010 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 PMF1-BGLAPU3KQ54 211 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 LAMA3Q16787 3333 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 HAS3O00219 553 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 ANKRD28O15084 1053 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 ACSL4O60488 711 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 B4GALT3O60512 393 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 ERN1O75460 977 aaKnown RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 PRLP01236 227 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 ANXA5P08758 320 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 DNAJA1P31689 397 aaKnown RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 RYKP34925 604 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 LIPAP38571 399 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 CLCN7P51798 805 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 SLC35A2P78381 396 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 CACNG1Q06432 222 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 SLC14A1Q13336 389 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 CAMK2GQ13555 558 aaPredicted RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 TAF1CQ15572 869 aaPredicted RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 SHQ1Q6PI26 577 aaKnown RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 USP50Q70EL3 339 aaPredicted RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 MFSD4AQ8N468 514 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 MINDY2Q8NBR6 621 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 PJA1Q8NG27 643 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 RHOXF1Q8NHV9 184 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 DYNC2LI1Q8TCX1 351 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 MAL2Q969L2 176 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 ZFYVE19Q96K21 471 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 MTERF1Q99551 399 aaKnown RBP7.97□□□□□ -1.13
CD46-208ENST00000367042 PKMYT1Q99640 499 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 CD244Q9BZW8 370 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 TPK1Q9H3S4 243 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 CCNB1IP1Q9NPC3 277 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 SH3BP4Q9P0V3 963 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 RAPGEFL1Q9UHV5 662 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 PCDHB8Q9UN66 801 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 RNF6Q9Y252 685 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 PRSS21Q9Y6M0 314 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 RALGAPA2Q2PPJ7 1873 aa7.97□□□□□ -1.13
CD46-208ENST00000367042 TAF4O00268 1085 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 IDH3BO43837 385 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 SH3BP5O60239 455 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 RFPL2O75678 378 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 CCNDBP1O95273 360 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 GJB5O95377 273 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 RETP07949 1114 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 CORO1AP31146 461 aaKnown RBP7.96□□□□□ -1.13
CD46-208ENST00000367042 RRM2P31350 389 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 GRK3P35626 688 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 CTSKP43235 329 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 MAD2L1BPQ15013 274 aaPredicted RBP7.96□□□□□ -1.13
CD46-208ENST00000367042 PCBP2Q15366 365 aaKnown RBP eCLIP7.96□□□□□ -1.134e-15■□□□□ 11.1
CD46-208ENST00000367042 LRRC73Q5JTD7 316 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 LAIR1Q6GTX8 287 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 CCBE1Q6UXH8 406 aaPredicted RBP7.96□□□□□ -1.13
CD46-208ENST00000367042 ZNF605Q86T29 641 aa7.96□□□□□ -1.13
CD46-208ENST00000367042 ZNF683Q8IZ20 524 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms