RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 MGME1Q9BQP7 344 aa13.24□□□□□ -0.29
PRKN-205ENST00000366897 CLMPQ9H6B4 373 aa13.24□□□□□ -0.29
PRKN-205ENST00000366897 KRT84Q9NSB2 600 aa13.24□□□□□ -0.29
PRKN-205ENST00000366897 FNIP2Q9P278 1114 aa13.24□□□□□ -0.29
PRKN-205ENST00000366897 UBA2Q9UBT2 640 aaPredicted RBP13.24□□□□□ -0.29
PRKN-205ENST00000366897 OSGIN1Q9UJX0 560 aa13.24□□□□□ -0.29
PRKN-205ENST00000366897 PRSS21Q9Y6M0 314 aa13.24□□□□□ -0.29
PRKN-205ENST00000366897 ANKRD36A6QL64 1941 aa13.24□□□□□ -0.29
PRKN-205ENST00000366897 A0A1W2PQ67 120 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 ITGAMP11215 1152 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 SGSHP51688 502 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 COPZ1P61923 177 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 PURAQ00577 322 aaKnown RBP13.23□□□□□ -0.29
PRKN-205ENST00000366897 PCBP2Q15366 365 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRKN-205ENST00000366897 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRKN-205ENST00000366897 OR4F3Q6IEY1 312 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 HORMAD1Q86X24 394 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 NLGN4XQ8N0W4 816 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 MINDY2Q8NBR6 621 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 ATL1Q8WXF7 558 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 ZNF566Q969W8 418 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 TPD52L3Q96J77 140 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 SUSD3Q96L08 255 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 NDEL1Q9GZM8 345 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 ROGDIQ9GZN7 287 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 PARVBQ9HBI1 364 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 ITGB1BP2Q9UKP3 347 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 PPT2Q9UMR5 302 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 ARIH1Q9Y4X5 557 aaPredicted RBP13.23□□□□□ -0.29
PRKN-205ENST00000366897 GREB1Q4ZG55 1949 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 PTPRDP23468 1912 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 TRBV5-3A0A0A0MS03 114 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 OR2A25A4D2G3 310 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 COL6A1P12109 1028 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 S100A3P33764 101 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 THPOP40225 353 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 GZMMP51124 257 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 CASP9P55211 416 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 RPP38P78345 283 aaKnown RBP13.23□□□□□ -0.29
PRKN-205ENST00000366897 ARHGEF7Q14155 803 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 ZNF404Q494X3 552 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 CAPN13Q6MZZ7 669 aaPredicted RBP13.23□□□□□ -0.29
PRKN-205ENST00000366897 GTF3C2Q8WUA4 911 aaPredicted RBP13.23□□□□□ -0.29
PRKN-205ENST00000366897 TRIB2Q92519 343 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 BHMTQ93088 406 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 Q96MT0 163 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 SEPT5Q99719 369 aaPredicted RBP13.23□□□□□ -0.29
PRKN-205ENST00000366897 TNKS2Q9H2K2 1166 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 C14orf119Q9NWQ9 140 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 TAS2R16Q9NYV7 291 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 NLRC5Q86WI3 1866 aa13.23□□□□□ -0.29
PRKN-205ENST00000366897 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 DRGXA6NNA5 263 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 ANKRD66B4E2M5 251 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 SH3BGRLO75368 114 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 IL6P05231 212 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 HSMCR30P0CW71 290 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 JUNDP17535 347 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 CPT1AP50416 773 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 SF1Q15637 639 aaKnown RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 RFX4Q33E94 735 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 KDM4DQ6B0I6 523 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 PDE12Q6L8Q7 609 aaKnown RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 SNX20Q7Z614 316 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 APH1BQ8WW43 257 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 FATE1Q969F0 183 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 ARMC5Q96C12 935 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 PSKH2Q96QS6 385 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 EBPLQ9BY08 206 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 ACPTQ9BZG2 426 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 HOXD1Q9GZZ0 328 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 OR51E2Q9H255 320 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 CRISPLD1Q9H336 500 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 LATS2Q9NRM7 1088 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 THG1LQ9NWX6 298 aaKnown RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 KLHL3Q9UH77 587 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 PCDHB9Q9Y5E1 797 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 GBF1Q92538 1859 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 COL4A4P53420 1690 aaPredicted RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 TNRC18O15417 2968 aaPredicted RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 F5H5T6 163 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 M0R082 166 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 MANBAO00462 879 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 RAD51BO15315 384 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 NDUFB5O43674 189 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 ASNA1O43681 348 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 DNAJB5O75953 348 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 TRPC1P48995 793 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 YBEYP58557 167 aaPredicted RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 UBE2UQ5VVX9 321 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 CCDC80Q76M96 950 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 ADAMTSL2Q86TH1 951 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 SVOPQ8N4V2 548 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 PAF1Q8N7H5 531 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 APOL4Q9BPW4 351 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 CHCHD6Q9BRQ6 235 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 AASDHPPTQ9NRN7 309 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 DHRS7Q9Y394 339 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 AGAP5A6NIR3 686 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 FAM220BPB1ANY3 271 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms