RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 XIAPP98170 497 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 SNTB1Q13884 538 aaKnown RBP8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 PCOLCEQ15113 449 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 SARM1Q6SZW1 724 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 NPNTQ6UXI9 565 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 NLRP9Q7RTR0 991 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 CCDC71Q8IV32 467 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 PLD5Q8N7P1 536 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 NIPA2Q8N8Q9 360 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 LINC01555Q8NAE3 123 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 MDS2Q8NDY4 140 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 LILRB4Q8NHJ6 448 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 TFGQ92734 400 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 HDAC10Q969S8 669 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 ZNF285Q96NJ3 590 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 FAM96AQ9H5X1 160 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 MVB12BQ9H7P6 319 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 SYNPO2LQ9H987 977 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 ETNK1Q9HBU6 452 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 GLOD4Q9HC38 313 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 ANKRD10Q9NXR5 420 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 LRFN1Q9P244 771 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 KCNN3Q9UGI6 736 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 NXT1Q9UKK6 140 aaKnown RBP8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 RNF6Q9Y252 685 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 ARL5AQ9Y689 179 aa8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 INTS1Q8N201 2190 aaKnown RBP8.07□□□□□ -1.12
HMGB1P39-201ENST00000366304 CCL22O00626 93 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 CTSVO60911 334 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 TPOP07202 933 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 PRSS56P0CW18 603 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 ABOP16442 354 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 FERP16591 822 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 ACADLP28330 430 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 PTGER1P34995 402 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 GJC1P36383 396 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 ARSFP54793 590 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 ALDH6A1Q02252 535 aaKnown RBP8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 ZNF33BQ06732 778 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 TUBA3CQ13748 450 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 SLC14A2Q15849 920 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 KRTCAP3Q53RY4 240 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 SPINK14Q6IE38 97 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 FRMPD2BQ6IN97 320 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 TUBA3EQ6PEY2 450 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 CNSTQ6PJW8 725 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 CLEC9AQ6UXN8 241 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 NAPRTQ6XQN6 538 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 RIPOR1Q6ZS17 1223 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 TMTC1Q8IUR5 882 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 BEST3Q8N1M1 668 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 C2orf73Q8N5S3 287 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 NEK11Q8NG66 645 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 BLOC1S5Q8TDH9 187 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 DLG3Q92796 817 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 OXNAD1Q96HP4 312 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 C18orf12Q96KH6 178 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 IMMP1LQ96LU5 166 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 PWWP2AQ96N64 755 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 ALPK1Q96QP1 1244 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 GPATCH1Q9BRR8 931 aaKnown RBP8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 MENTQ9BUN1 341 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 HAUS4Q9H6D7 363 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 ENAMQ9NRM1 1142 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 FANCLQ9NW38 375 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 STMN3Q9NZ72 180 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 CIDEBQ9UHD4 219 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 L3MBTL1Q9Y468 752 aa8.06□□□□□ -1.12
HMGB1P39-201ENST00000366304 IGLV3-12A0A075B6K2 115 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 LOC105369274A0A096LPK9 316 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 LOC102723532A0A0G2JNH3 316 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 FITM1A5D6W6 292 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 AGAP14A8MT82 685 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 ISM1B1AKI9 464 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 IDSB3KWA1 339 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 SRP72O76094 671 aaKnown RBP8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 ZWINTO95229 277 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 HEXAP06865 529 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 INHBBP09529 407 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 FDXRP22570 491 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 PCSK6P29122 969 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 SHMT2P34897 504 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 CD96P40200 585 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 CD151P48509 253 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 CARSP49589 748 aaKnown RBP8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 FANCCQ00597 558 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 AP1B1Q10567 949 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 MYBPHQ13203 477 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 ITGA9Q13797 1035 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 PIGHQ14442 188 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 FKBP15Q5T1M5 1219 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 ABHD17BQ5VST6 288 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 APTXQ7Z2E3 356 aaKnown RBP8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 HOOK3Q86VS8 718 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 OR4N4Q8N0Y3 316 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 CIARTQ8N365 385 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 CLDN19Q8N6F1 224 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 NUDT8Q8WV74 236 aa8.05□□□□□ -1.12
HMGB1P39-201ENST00000366304 RAPGEF5Q92565 580 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms