RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ANKRD20A8PQ5CZ79 823 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 PIP5KL1Q5T9C9 394 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 TEDDM1Q5T9Z0 273 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 KIAA0895LQ68EN5 471 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 NCBP2-AS2Q69YL0 99 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 ABLIM2Q6H8Q1 611 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 NEK5Q6P3R8 708 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 NCEH1Q6PIU2 408 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 LINGO4Q6UY18 593 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 TRIM69Q86WT6 500 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 SLC35F6Q8N357 371 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 HDDC3Q8N4P3 179 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 ZCCHC9Q8N567 271 aaKnown RBP7.75□□□□□ -1.17
YBX3-204ENST00000366290 PLD5Q8N7P1 536 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 KCTD6Q8NC69 237 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 TRIM58Q8NG06 486 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 EXD1Q8NHP7 514 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 HMCESQ96FZ2 354 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 FBXL20Q96IG2 436 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 RNF157Q96PX1 679 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 PRPF18Q99633 342 aaKnown RBP7.75□□□□□ -1.17
YBX3-204ENST00000366290 CALN1Q9BXU9 219 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 CATSPERBQ9H7T0 1116 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 TM9SF3Q9HD45 589 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 GRHPRQ9UBQ7 328 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 SLCO1B1Q9Y6L6 691 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 SMG1Q96Q15 3661 aaKnown RBP7.75□□□□□ -1.17
YBX3-204ENST00000366290 ITPR1Q14643 2758 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 ANKRD36A6QL64 1941 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 A1L4Q6 167 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 MIF4GDA9UHW6 222 aaKnown RBP7.74□□□□□ -1.17
YBX3-204ENST00000366290 VWC2LB2RUY7 222 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 TRIM38O00635 465 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 VILLO15195 856 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 ASNA1O43681 348 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 PEX1O43933 1283 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 MFSD11O43934 449 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 TNFRSF6BO95407 300 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 CHRM2P08172 466 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 ITGA5P08648 1049 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 KRT10P13645 584 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 CD59P13987 128 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 NDST2P52849 883 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 METAP1P53582 386 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 BLOC1S1P78537 153 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 GBE1Q04446 702 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 CCDC15Q0P6D6 951 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 PAFAH1B3Q15102 231 aaKnown RBP7.74□□□□□ -1.17
YBX3-204ENST00000366290 CARD16Q5EG05 197 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 ZNF569Q5MCW4 686 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 DPY19L3Q6ZPD9 716 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 RCOR2Q8IZ40 523 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 MINDY1Q8N5J2 469 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 MBD3L2Q8NHZ7 208 aaPredicted RBP7.74□□□□□ -1.17
YBX3-204ENST00000366290 CELF6Q96J87 481 aaKnown RBP7.74□□□□□ -1.17
YBX3-204ENST00000366290 WDR24Q96S15 920 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 SLC39A8Q9C0K1 460 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 MYLK2Q9H1R3 596 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 EBF2Q9HAK2 575 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 PREBQ9HCU5 417 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 KLC4Q9NSK0 619 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 IL36AQ9UHA7 158 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 HPCAL4Q9UM19 191 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 USP22Q9UPT9 525 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 DRG1Q9Y295 367 aaKnown RBP7.74□□□□□ -1.17
YBX3-204ENST00000366290 DTNAQ9Y4J8 743 aa7.74□□□□□ -1.17
YBX3-204ENST00000366290 GOLGA6L9A6NEM1 432 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 OR2W5A6NFC9 320 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 RNF103O00237 685 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 DFNA5O60443 496 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 SNX2O60749 519 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 CER1O95813 267 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 ATP1A1P05023 1023 aaKnown RBP7.73□□□□□ -1.17
YBX3-204ENST00000366290 NPPBP16860 134 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 CSNK1EP49674 416 aaKnown RBP7.73□□□□□ -1.17
YBX3-204ENST00000366290 DNA2P51530 1060 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 CLCN2P51788 898 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 CCNHP51946 323 aaPredicted RBP7.73□□□□□ -1.17
YBX3-204ENST00000366290 ATXN3P54252 364 aaPredicted RBP7.73□□□□□ -1.17
YBX3-204ENST00000366290 RWDD2BP57060 319 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 TIRAPP58753 221 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 OVGP1Q12889 678 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 ATP1A4Q13733 1029 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 HNRNPDQ14103 355 aaKnown RBP7.73□□□□□ -1.17
YBX3-204ENST00000366290 PTPRRQ15256 657 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 RPS6KA1Q15418 735 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 KIF19Q2TAC6 998 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 HLA-BQ31612 363 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 TFDP3Q5H9I0 405 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 TMCO3Q6UWJ1 677 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 ERN2Q76MJ5 926 aaKnown RBP7.73□□□□□ -1.17
YBX3-204ENST00000366290 IQCHQ86VS3 1027 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 ZSCAN30Q86W11 494 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 GATAD2AQ86YP4 633 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 MAP7D3Q8IWC1 876 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 MYRIPQ8NFW9 859 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 OR2AP1Q8NGE2 309 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 HCAR2Q8TDS4 363 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 GANCQ8TET4 914 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 UBE2Q2Q8WVN8 375 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms