RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SPATS2LQ9NUQ6 558 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 DCTN4Q9UJW0 460 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 TMPRSS11EQ9UL52 423 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 RAP2CQ9Y3L5 183 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 APCP25054 2843 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 F8P00451 2351 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 A0A0G2JND7 137 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 IQCF5A8MTL0 148 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 C9orf172C9J069 976 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CFAP99D6REC4 459 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 SLCO1B7G3V0H7 640 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 QSOX1O00391 747 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 AP1G1O43747 822 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 KLK8O60259 260 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 AGFG2O95081 481 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 PAK4O96013 591 aaPredicted RBP10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 ANXA6P08133 673 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 OR56A5P0C7T3 313 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CBSLP0DN79 551 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 MTHFD2P13995 350 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 ATP1B2P14415 290 aaPredicted RBP10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CD82P27701 267 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CBSP35520 551 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 DPTQ07507 201 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 SETDB1Q15047 1291 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 ACOX1Q15067 660 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 TTLL9Q3SXZ7 439 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CFAP157Q5JU67 520 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 LDLRAP1Q5SW96 308 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 SPNS2Q8IVW8 549 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CPNE9Q8IYJ1 553 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 ZBTB2Q8N680 514 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CLDN19Q8N6F1 224 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 LKAAEAR1Q8TD35 194 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 EEF1AKMT1Q8WVE0 214 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 USP7Q93009 1102 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 SCAMP4Q969E2 229 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 FUBP1Q96AE4 644 aaKnown RBP10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CCDC74AQ96AQ1 378 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 FAM136AQ96C01 138 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 AP2M1Q96CW1 435 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 DCUN1D1Q96GG9 259 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 TMEM237Q96Q45 408 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 WWP1Q9H0M0 922 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 ABCF3Q9NUQ8 709 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 KCTD5Q9NXV2 234 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 APOBEC3BQ9UH17 382 aaKnown RBP10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 CD84Q9UIB8 345 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 RNF112Q9ULX5 631 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 FADS3Q9Y5Q0 445 aa10.94□□□□□ -0.66
CSNK1E-202ENST00000366216 FADS2P1A8MWK0 482 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 STX16-NPEPL1H3BU86 382 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 BTN3A1O00481 513 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 STX16O14662 325 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 FPGTO14772 594 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 KPNA5O15131 536 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 RPLP0P05388 317 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 KITP10721 976 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 MAPK10P53779 464 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 AQP5P55064 265 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 HERVK_113P63132 956 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 RPS21P63220 83 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 GBX1Q14549 363 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 TSNQ15631 228 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 ARL13AQ5H913 290 aaPredicted RBP10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 ZNF678Q5SXM1 525 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 KIAA1161Q6NSJ0 714 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 TMPRSS9Q7Z410 1059 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 ADAMTSL2Q86TH1 951 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 SFTPA2Q8IWL1 248 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 SDR16C5Q8N3Y7 309 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 FITM2Q8N6M3 262 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 CCNYL1Q8N7R7 359 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 ZNF781Q8N8C0 355 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 KYQ8NBH2 561 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 CXorf40AQ8TE69 158 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 SSC4DQ8WTU2 575 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 JPH3Q8WXH2 748 aaPredicted RBP10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 GLYATL1Q969I3 302 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 LRRC37BQ96QE4 947 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 WRAP53Q9BUR4 548 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 LRRC61Q9BV99 259 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 C1QTNF3Q9BXJ4 246 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 ERVK-6Q9BXR3 956 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 EML4Q9HC35 981 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 SARS2Q9NP81 518 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 PNPOQ9NVS9 261 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 GULP1Q9UBP9 304 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 VTI1BQ9UEU0 232 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 IKZF3Q9UKT9 509 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 ITM2BQ9Y287 266 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 PDZD2O15018 2839 aa10.93□□□□□ -0.66
CSNK1E-202ENST00000366216 MED13LQ71F56 2210 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 ADGRG4Q8IZF6 3080 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 NPEPPSL1A6NEC2 478 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 STMND1H3BQB6 276 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 UBXN8O00124 270 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 CDC7O00311 574 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms