RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 LINGO4Q6UY18 593 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 SCARA5Q6ZMJ2 495 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF600Q6ZNG1 722 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 LINC01551Q86U37 167 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC44A2Q8IWA5 706 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 SAXO1Q8IYX7 474 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 GPC2Q8N158 579 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 CPSF7Q8N684 471 aaKnown RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 Q8NDZ9 215 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR4D10Q8NGI6 311 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR6T1Q8NGN1 323 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR2L8Q8NGY9 312 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR6F1Q8NGZ6 308 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR52N5Q8NH56 324 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 PHLDA1Q8WV24 401 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 SNRNP27Q8WVK2 155 aaKnown RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 APOBEC4Q8WW27 367 aaKnown RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 BRI3BPQ8WY22 251 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 MUL1Q969V5 352 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 TBC1D20Q96BZ9 403 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 PELI1Q96FA3 418 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 RRNAD1Q96FB5 475 aaKnown RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 C16orf74Q96GX8 76 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 LINC00477Q96M19 166 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF641Q96N77 438 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 LPAR4Q99677 370 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 NUP85Q9BW27 656 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 APOL5Q9BWW9 433 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 GLIS2Q9BZE0 524 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 LMAN2LQ9H0V9 348 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 THAP2Q9H0W7 228 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 SEMA6AQ9H2E6 1030 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 A4GALTQ9NPC4 353 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 HPS4Q9NQG7 708 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 CHST12Q9NRB3 414 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPHK1Q9NYA1 384 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 FRMD4AQ9P2Q2 1039 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 PEMTQ9UBM1 199 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 GAGE2DQ9UEU5 116 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 MARCOQ9UEW3 520 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 KCND3Q9UK17 655 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF835Q9Y2P0 537 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 TMA7Q9Y2S6 64 aaKnown RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 GDAQ9Y2T3 454 aa-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPIN1Q9Y657 262 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPATA31D1Q6ZQQ2 1576 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 TRGV8A0A0C4DH27 118 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 IGHV3-20A0A0C4DH32 117 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 A0A1B0GUA9 196 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 CCDC189A1A4V9 331 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 ELOVL7A1L3X0 281 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 GAPDHSO14556 408 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 MAP2K7O14733 419 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 PMM2O15305 246 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 RNASEH1O60930 286 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 MTRF1O75570 445 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 KRT33AO76009 404 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 KRT38O76015 456 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 FGF18O76093 207 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 ACP2P11117 423 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 MYOGP15173 224 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 MAGP20916 626 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC6A6P31641 620 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 TNFRSF4P43489 277 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 BRCC3P46736 316 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC25A1P53007 311 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SUCLG1P53597 346 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 IFIT5Q13325 482 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 CYLC2Q14093 348 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SQLEQ14534 574 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 NAA25Q14CX7 972 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 KRTAP13-2Q52LG2 175 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC25A53Q5H9E4 307 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 FAM83BQ5T0W9 1011 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 AGAP6Q5VW22 663 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 TXNDC8Q6A555 127 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 TTC19Q6DKK2 380 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 FAM109BQ6ICB4 259 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SDE2Q6IQ49 451 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SASS6Q6UVJ0 657 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 LEKR1Q6ZMV7 388 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZFP2Q6ZN57 461 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 BBS12Q6ZW61 710 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SYT13Q7L8C5 426 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 R3HCC1LQ7Z5L2 792 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SYVN1Q86TM6 617 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 CCDC190Q86UF4 302 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 APOBEC3FQ8IUX4 373 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SUGP1Q8IWZ8 645 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 CDK20Q8IZL9 346 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 ARIH2OSQ8N7S6 290 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 LINS1Q8NG48 757 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 HM13Q8TCT9 377 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 GOLGA1Q92805 767 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 DAZLQ92904 295 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 EID2BQ96D98 161 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 RMI2Q96E14 147 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 MTERF3Q96E29 417 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZBED6CLQ96FA7 236 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 TAAR6Q96RI8 345 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms