RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 NIPSNAP2O75323 286 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 HPRP00739 348 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 HOXD8P13378 290 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-201ENST00000361716 CDKN1CP49918 316 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-201ENST00000361716 HUNKP57058 714 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 IRF3Q14653 427 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 BAK1Q16611 211 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 CARD16Q5EG05 197 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 SPANXN4Q5MJ08 99 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 C10orf120Q5SQS8 335 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 SPATA19Q7Z5L4 167 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 KRTCAP2Q8N6L1 136 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 OR4K2Q8NGD2 314 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 EGLN2Q96KS0 407 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 OR52E6Q96RD3 313 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 FKBP14Q9NWM8 211 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 TMPRSS11EQ9UL52 423 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 RWDD3Q9Y3V2 267 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 PRKAB1Q9Y478 270 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 B8ZZF3 427 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 E9PAM4 449 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 PDHXO00330 501 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 PIRO00625 290 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 GPR182O15218 404 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 DNAJB5O75953 348 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 SLITRK5O94991 958 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 MLYCDO95822 493 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 TSPAN19P0C672 248 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 CYP2A6P11509 494 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-201ENST00000361716 RPS3P23396 243 aaKnown RBP eCLIP12.39□□□□□ -0.43
VAMP1-201ENST00000361716 PCSK1P29120 753 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 GDF5P43026 501 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 RENBPP51606 427 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 CASP9P55211 416 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 ERVK-8P63133 956 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 RAD51Q06609 339 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 ZMYND11Q15326 602 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 PLET1Q6UQ28 207 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 TLK2Q86UE8 772 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 CILP2Q8IUL8 1156 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 SIDT2Q8NBJ9 832 aaKnown RBP12.39□□□□□ -0.43
VAMP1-201ENST00000361716 LPCAT1Q8NF37 534 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 CHAC2Q8WUX2 184 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 TMEM203Q969S6 136 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 IL1RAPQ9NPH3 570 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 TRMT6Q9UJA5 497 aaKnown RBP12.39□□□□□ -0.43
VAMP1-201ENST00000361716 NOD1Q9Y239 953 aa12.39□□□□□ -0.43
VAMP1-201ENST00000361716 A0A1W2PQH9 124 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 OR2A25A4D2G3 310 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 MAFKO60675 156 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 PSIP1O75475 530 aaKnown RBP12.38□□□□□ -0.43
VAMP1-201ENST00000361716 B3GALT4O96024 378 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 GJA5P36382 358 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 DAPP51397 102 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 HOXC5Q00444 222 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 DDX39BQ13838 428 aaKnown RBP12.38□□□□□ -0.43
VAMP1-201ENST00000361716 IRAK1BP1Q5VVH5 260 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 GPRIN3Q6ZVF9 776 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 GPRC5AQ8NFJ5 357 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 FCRL5Q96RD9 977 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 TRIM45Q9H8W5 580 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-201ENST00000361716 CCNB1IP1Q9NPC3 277 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 ATP13A2Q9NQ11 1180 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 RAD18Q9NS91 495 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 CATSPERZQ9NTU4 200 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 TMEFF2Q9UIK5 374 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-201ENST00000361716 AGO1Q9UL18 857 aaKnown RBP12.38□□□□□ -0.43
VAMP1-201ENST00000361716 PLK4O00444 970 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 PLD2O14939 933 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 PCDHGA12O60330 932 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 ECI2O75521 394 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 CD1DP15813 335 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 TGFBR2P37173 567 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 CBX2Q14781 532 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-201ENST00000361716 MAD2L1BPQ15013 274 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-201ENST00000361716 RFX4Q33E94 735 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 TIGD5Q53EQ6 642 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 ALFQ53S48 1182 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 KANK2Q63ZY3 851 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 TUBA3EQ6PEY2 450 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 LAX1Q8IWV1 398 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 SLC7A6Q92536 515 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 DIRAS2Q96HU8 199 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 FRMD6Q96NE9 622 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 PRKD2Q9BZL6 878 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 EVA1BQ9NVM1 165 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 SNX7Q9UNH6 387 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 HCN4Q9Y3Q4 1203 aa12.38□□□□□ -0.43
VAMP1-201ENST00000361716 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-201ENST00000361716 ZNF780AO75290 641 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-201ENST00000361716 SEC22BO75396 215 aa12.37□□□□□ -0.43
VAMP1-201ENST00000361716 GRK4P32298 578 aa12.37□□□□□ -0.43
VAMP1-201ENST00000361716 GPR15P49685 360 aa12.37□□□□□ -0.43
VAMP1-201ENST00000361716 ATN1P54259 1190 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-201ENST00000361716 ELP6Q0PNE2 266 aa12.37□□□□□ -0.43
VAMP1-201ENST00000361716 POU4F3Q15319 338 aa12.37□□□□□ -0.43
VAMP1-201ENST00000361716 SLC39A12Q504Y0 691 aa12.37□□□□□ -0.43
VAMP1-201ENST00000361716 RFTN2Q52LD8 501 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-201ENST00000361716 TOR2AQ5JU69 321 aa12.37□□□□□ -0.43
VAMP1-201ENST00000361716 SIRPB2Q5JXA9 342 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms