RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 RAB30Q15771 203 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 OCLNQ16625 522 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 CA9Q16790 459 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 UBAP2Q5T6F2 1119 aaKnown RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 TIGD4Q8IY51 512 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ZNF565Q8N9K5 539 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ARNTL2Q8WYA1 636 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 TUBGCP5Q96RT8 1024 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 CCDC86Q9H6F5 360 aaKnown RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 IQCF5A8MTL0 148 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 SLC31A1O15431 190 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 MT-ND5P03915 603 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 TOR1AIP1Q5JTV8 583 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 TUBA3EQ6PEY2 450 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 IQCHQ86VS3 1027 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 C11orf49Q9H6J7 331 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 MKS1Q9NXB0 559 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ZIM2Q9NZV7 527 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 UNCXA6NJT0 531 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 LIMK2P53671 638 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 CELF5Q8N6W0 485 aaKnown RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 HTRA1Q92743 480 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 TBATAQ96M53 351 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ST3GAL4Q11206 333 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 SPIN3Q5JUX0 258 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 OR52J3Q8NH60 311 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 SP140LQ9H930 580 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 TBC1D17Q9HA65 648 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 MTMR10Q9NXD2 777 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 PIP5K1BO14986 540 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 PLEKHG6Q3KR16 790 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 FZD10Q9ULW2 581 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 U3KQV3 271 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 E7ENX8 843 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 GJB6O95452 261 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 HRH2P25021 359 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 RPL10P27635 214 aaKnown RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 CAV3P56539 151 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 NRG1Q02297 640 aaPredicted RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 NXPE1Q8N323 547 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 KCTD7Q96MP8 289 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 B3GNT4Q9C0J1 378 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 OSBPL2Q9H1P3 480 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 DEPDC5O75140 1603 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 EEFSECP57772 596 aaKnown RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 ERVK-8P63133 956 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ABHD15Q6UXT9 468 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ZNF709Q8N972 641 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 DENND6BQ8NEG7 585 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 NECAB3Q96P71 396 aaPredicted RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 MYOCQ99972 504 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 FAM83CQ9BQN1 747 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 PTGES2Q9H7Z7 377 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 CCNKO75909 580 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ITGB5P18084 799 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 GADD45AP24522 165 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 IDNKQ5T6J7 187 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ZNF227Q86WZ6 799 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 METTL8Q9H825 291 aaKnown RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 ABCD2Q9UBJ2 740 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 BANF1O75531 89 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 SEMA3AQ14563 771 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 CD180Q99467 661 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 C11orf16Q9NQ32 467 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ZNF358Q9NW07 568 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 PRR5-ARHGAP8B1AHC4 643 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ARL6IP5O75915 188 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 TAS2R40P59535 323 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ARHGAP8P85298 464 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 KIF26BQ2KJY2 2108 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ZDHHC21Q8IVQ6 265 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 CARS2Q9HA77 564 aaKnown RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 LRRC4CQ9HCJ2 640 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 MFSD11O43934 449 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 COL6A1P12109 1028 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 XKP51811 444 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ASTE1Q2TB18 679 aaPredicted RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 DRICH1Q6PGQ1 229 aaPredicted RBP9.47□□□□□ -0.89
CUX1-203ENST00000360264 CLNKQ7Z7G1 428 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 SPPL2CQ8IUH8 684 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 NMUR2Q9GZQ4 415 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 INSL6Q9Y581 213 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 ARHGEF28Q8N1W1 1705 aaKnown RBP9.46□□□□□ -0.89
CUX1-203ENST00000360264 SPATA31D3P0C874 917 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 HERV-K104P61576 105 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 SEC23BQ15437 767 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 SPRYD7Q5W111 196 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 SPATA31D4Q6ZUB0 917 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 GALNT5Q7Z7M9 940 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 FBXO15Q8NCQ5 510 aaPredicted RBP9.46□□□□□ -0.89
CUX1-203ENST00000360264 G6PC3Q9BUM1 346 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 MS4A12Q9NXJ0 267 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 TSPAN1O60635 241 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 PFKMP08237 780 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 DRD4P21917 467 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 TUBA1BP68363 451 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 TUBA4AP68366 448 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 PTPN20Q4JDL3 420 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 TUBA1AQ71U36 451 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms