RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 MAPK15Q8TD08 544 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 PIK3R3Q92569 461 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 KCNJ9Q92806 393 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 TMCO6Q96DC7 493 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 MRGPRX2Q96LB1 330 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 TPT1P8Q9HAU6 139 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 TRPV5Q9NQA5 729 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 TUBA8Q9NY65 449 aaPredicted RBP13.4□□□□□ -0.26
VCP-201ENST00000358901 YIPF1Q9Y548 306 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 SPIN1Q9Y657 262 aaPredicted RBP13.4□□□□□ -0.26
VCP-201ENST00000358901 STX16O14662 325 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 PDPK1O15530 556 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 SNNO75324 88 aaPredicted RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 FPR1P21462 350 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 LEPRP48357 1165 aaKnown RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 HNMTP50135 292 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 CAP1Q01518 475 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 KCNAB2Q13303 367 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 LCN1P1Q5VSP4 162 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 ZNF773Q6PK81 442 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 BEND5Q7L4P6 421 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 GPRIN1Q7Z2K8 1008 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 SIX5Q8N196 739 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 PYURFQ96I23 114 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 SLC35G5Q96KT7 338 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 EFCAB11Q9BUY7 163 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 TRIT1Q9H3H1 467 aaKnown RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 ANKRA2Q9H9E1 313 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 TMEM248Q9NWD8 314 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 TMEM9Q9P0T7 183 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 AREL1O15033 823 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 INMTO95050 263 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 ZNF792Q3KQV3 632 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 STEAP4Q687X5 459 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 FAM171BQ6P995 826 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 ZNF598Q86UK7 904 aaKnown RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 MARVELD2Q8N4S9 558 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 TMEM203Q969S6 136 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 RBM47A0AV96 593 aaKnown RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 ABCB7O75027 752 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 KELP23276 732 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 NIPAL4Q0D2K0 466 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 CARD16Q5EG05 197 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 NPWQ8N729 165 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 ZNF366Q8N895 744 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 OR14C36Q8NHC7 312 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 CD99L2Q8TCZ2 262 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 SNX33Q8WV41 574 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 AUTS2Q8WXX7 1259 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 SLC2A13Q96QE2 648 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 SYT17Q9BSW7 474 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 RIOK2Q9BVS4 552 aaKnown RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 MRM3Q9HC36 420 aaKnown RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 MARCH4Q9P2E8 410 aaPredicted RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 SNX7Q9UNH6 387 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 MAN2B2Q9Y2E5 1009 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 OR1I1O60431 355 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 CLPXO76031 633 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 C1QTNF8P60827 252 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 MVKQ03426 396 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 NUMA1Q14980 2115 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 ATP13A5Q4VNC0 1218 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 POMZP3Q6PJE2 187 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 CMTM8Q8IZV2 173 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 KREMEN2Q8NCW0 462 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 ZNF248Q8NDW4 579 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 IMP4Q96G21 291 aaKnown RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 LRCH3Q96II8 777 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 PDLIM7Q9NR12 457 aa13.39□□□□□ -0.27
VCP-201ENST00000358901 CCM2LQ9NUG4 571 aaPredicted RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 RPL36Q9Y3U8 105 aaKnown RBP13.39□□□□□ -0.27
VCP-201ENST00000358901 RIIAD1A6NNX1 92 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 H7C0S8 307 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ACOX3O15254 700 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 MNDAP41218 407 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 DGKGP49619 791 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 E2F2Q14209 437 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 MOGQ16653 247 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 MYLK3Q32MK0 819 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 UNC50Q53HI1 259 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 Q6ZVU0 165 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 PHC3Q8NDX5 983 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ZNF641Q96N77 438 aaPredicted RBP13.38□□□□□ -0.27
VCP-201ENST00000358901 SLC29A3Q9BZD2 475 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 THUMPD1Q9NXG2 353 aaKnown RBP13.38□□□□□ -0.27
VCP-201ENST00000358901 MYH3P11055 1940 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 FKTNO75072 461 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 NFATC1O95644 943 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 GBAP04062 536 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 CSTF2P33240 577 aaKnown RBP eCLIP13.38□□□□□ -0.27
VCP-201ENST00000358901 PPP2R2BQ00005 443 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 CGB2Q6NT52 195 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 OAFQ86UD1 273 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 GALNT13Q8IUC8 556 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ZCCHC10Q8TBK6 192 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ISOC1Q96CN7 298 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms