RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GRK1Q15835 563 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 KIAA1614Q5VZ46 1190 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 MTSS1LQ765P7 747 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 COMMD2Q86X83 199 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 FAM20CQ8IXL6 584 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 CARNMT1Q8N4J0 409 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZSCAN1Q8NBB4 408 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 CHST13Q8NET6 341 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TWNKQ96RR1 684 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 FAIM2Q9BWQ8 316 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 CNTN3Q9P232 1028 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 LOC100509620A0A075B734 347 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 EIF3FO00303 357 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 OR4F21O95013 312 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 IRF1P10914 325 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DCST1Q5T197 706 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 SLC25A25Q6KCM7 469 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 FAM196AQ6ZSG2 479 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NT5DC4Q86YG4 428 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 OR5B17Q8NGF7 314 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 THAP6Q8TBB0 222 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ASPNQ9BXN1 380 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 MS4A12Q9NXJ0 267 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 KCNN3Q9UGI6 736 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TEX264Q9Y6I9 313 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PKD1L2Q7Z442 2459 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DYSFO75923 2080 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 C5orf51A6NDU8 294 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 A6NL46 340 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 FCER2P06734 321 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NR2F1P10589 423 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 GADD45AP24522 165 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 S100A10P60903 97 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NIPAL4Q0D2K0 466 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NFIAQ12857 509 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 GRIN2CQ14957 1233 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZBTB6Q15916 424 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 UGCGQ16739 394 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM44Q2T9K0 475 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 LIPKQ5VXJ0 399 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DCBLD1Q8N8Z6 715 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 OR4L1Q8NH43 312 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TFAP2BQ92481 460 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ATG4CQ96DT6 458 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 CNDP2Q96KP4 475 aaKnown RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PELOQ9BRX2 385 aaKnown RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM168Q9H0V1 697 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 HSPE1-MOB4S4R3N1 261 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 EFNA1P20827 205 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 KIAA0930Q6ICG6 404 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 GPALPP1Q8IXQ4 340 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 OR2T35Q8NGX2 323 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 WDR18Q9BV38 432 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TFB2MQ9H5Q4 396 aaKnown RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NIPAL2Q9H841 368 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 AKTIPQ9H8T0 292 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 KLK14Q9P0G3 267 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ENTPD4Q9Y227 616 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PTPRJQ12913 1337 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 CDK5RAP2Q96SN8 1893 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 MANBAO00462 879 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 GGT1P19440 569 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ATXN7L3Q14CW9 347 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 LAPTM4AQ15012 233 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 COQ5Q5HYK3 327 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 FAM217AQ8IXS0 508 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF675Q8TD23 568 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 THUMPD1Q9NXG2 353 aaKnown RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PSAT1Q9Y617 370 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TLL1O43897 1013 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ADRA1BP35368 520 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DDX53Q86TM3 631 aaKnown RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 GHDCQ8N2G8 530 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 C15orf40Q8WUR7 153 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF471Q9BX82 626 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ST6GALNAC4Q9H4F1 302 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 KCNK13Q9HB14 408 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 FAM118AQ9NWS6 357 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 MAP4K5Q9Y4K4 846 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF705EA8MWA4 302 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 RFPL3O75679 317 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 LYPLA2O95372 231 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 SPARCP09486 303 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 HDCP19113 662 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PCSK6P29122 969 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DNASE1L1P49184 302 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DEFA6Q01524 100 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DPY19L1Q2PZI1 675 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 C4orf46Q504U0 113 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PXDC1Q5TGL8 231 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 HJURPQ8NCD3 748 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 LMAN2LQ9H0V9 348 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TRIM36Q9NQ86 728 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DMAC2Q9NW81 257 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PROM1O43490 865 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DSG2Q14126 1118 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 GPR19Q15760 415 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF425Q6IV72 752 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ARL9Q6T311 187 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ATAD1Q8NBU5 361 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms