RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RNF167Q9H6Y7 350 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 POPDC3Q9HBV1 291 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 ABCB9Q9NP78 766 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CCNB1IP1Q9NPC3 277 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 RHCGQ9UBD6 479 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 RAB23Q9ULC3 237 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 LTBP3Q9NS15 1303 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CENPFP49454 3210 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 NINQ8N4C6 2090 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 GLYATL1P3A0A0U1RQE8 302 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 TMEM221A6NGB7 291 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 MAGEB17A8MXT2 336 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 C5orf58C9J3I9 102 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 OR7A17O14581 309 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 AXIN1O15169 862 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 NDUFB5O43674 189 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 ERN1O75460 977 aaKnown RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CKMP06732 381 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 STSP08842 583 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CCDC159P0C7I6 412 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 WEE1P30291 646 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 DNAJA1P31689 397 aaKnown RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 OR1D2P34982 312 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CDKN2CP42773 168 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 MAPKAPK2P49137 400 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 GATMP50440 423 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 SMAD3P84022 425 aaKnown RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CREMQ03060 361 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CARD16Q5EG05 197 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 XKR4Q5GH76 650 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 ARMCX4Q5H9R4 360 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 HECTD3Q5T447 861 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 MANEALQ5VSG8 457 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 UBE2UQ5VVX9 321 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 MFSD14CQ5VZR4 134 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 C8orf82Q6P1X6 216 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CCBE1Q6UXH8 406 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 BEND5Q7L4P6 421 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 ADGRG2Q8IZP9 1017 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 SLC34A3Q8N130 599 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 FAM83FQ8NEG4 500 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 KBTBD8Q8NFY9 601 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 OR9Q1Q8NGQ5 310 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 OR5AK3PQ8NH89 298 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 TCF25Q9BQ70 676 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 BRINP2Q9C0B6 783 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 TOR4AQ9NXH8 423 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 PCDHB8Q9UN66 801 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 PMF1-BGLAPU3KQ54 211 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 A0A0U1RQF3 1178 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 RBM47A0AV96 593 aaKnown RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 OR2AG2A6NM03 316 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 COQ9O75208 318 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 PEX11BO96011 259 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 HPRP00739 348 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 NPPAP01160 153 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 EPOP01588 193 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 SERPIND1P05546 499 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ASGR1P07306 291 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 CD40LGP29965 261 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ALDH9A1P49189 494 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ISL1P61371 349 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ELP6Q0PNE2 266 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 GRIK2Q13002 908 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 SLC14A2Q15849 920 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 PLEKHG6Q3KR16 790 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF691Q5VV52 312 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 FAM180BQ6P0A1 224 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 C2orf73Q8N5S3 287 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 CAMKK1Q8N5S9 505 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ATL1Q8WXF7 558 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 TTPALQ9BTX7 342 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ITPAQ9BY32 194 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 OR51E2Q9H255 320 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 C11orf16Q9NQ32 467 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 SLC6A13Q9NSD5 602 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 GPR83Q9NYM4 423 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 IL37Q9NZH6 218 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF221Q9UK13 617 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 KLHL20Q9Y2M5 609 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 WBP11Q9Y2W2 641 aaKnown RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 DHRS7Q9Y394 339 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 MAP4K5Q9Y4K4 846 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 PCDHGA10Q9Y5H3 936 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 CLDN11O75508 207 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 PRAMEF12O95522 483 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ITIH1P19827 911 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 S100A1P23297 94 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 SLC6A4P31645 630 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 KRT20P35900 424 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF140P52738 457 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 CAMK2GQ13555 558 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 HIST2H2ACQ16777 129 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 HKDC1Q2TB90 917 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 PTCHD3Q3KNS1 767 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 SPDYE7PQ495Y7 208 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 MFSD4BQ5TF39 518 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 KIAA1614Q5VZ46 1190 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 DESI1Q6ICB0 168 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 TYW3Q6IPR3 259 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms