RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 TRNP1Q6NT89 227 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 DPY19L2P1Q6NXN4 242 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 PRR23BQ6ZRT6 265 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 CLIP4Q8N3C7 705 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 RHEBL1Q8TAI7 183 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 WFIKKN2Q8TEU8 576 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 OVCA2Q8WZ82 227 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 KAT8Q9H7Z6 458 aaKnown RBP14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 NANOGQ9H9S0 305 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 WDR6Q9NNW5 1121 aaKnown RBP14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 MYOCOSA0A1B0GUC4 107 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 MBLAC1A4D2B0 266 aaPredicted RBP14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 UPK3BL1B0FP48 263 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 UPK3BL2E5RIL1 263 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 HAT1O14929 419 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 KLK1P06870 262 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 TYRP14679 529 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 MAPK15Q8TD08 544 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 RASSF5Q8WWW0 418 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 ZUFSPQ96AP4 578 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 ART5Q96L15 291 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 EFCAB11Q9BUY7 163 aa14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 CFAP20Q9Y6A4 193 aaKnown RBP14.28□□□□□ -0.12
SLC6A20-202ENST00000358525 IRGMA1A4Y4 181 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 MPZL2O60487 215 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 TNFRSF21O75509 655 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 GNRH1P01148 92 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 PRSS56P0CW18 603 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 C4BPBP20851 252 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 HNF1BP35680 557 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 OR2T5Q6IEZ7 315 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 TTC9BQ8N6N2 239 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 FLCNQ8NFG4 579 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 OR2T29Q8NH02 315 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 FAM110BQ8TC76 370 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 PGAP3Q96FM1 320 aaPredicted RBP14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 PCBD2Q9H0N5 130 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 MTMR10Q9NXD2 777 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 MAP10Q9P2G4 905 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 C2orf78A6NCI8 922 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 CLDN25C9JDP6 229 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 ADH5P11766 374 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 FDXRP22570 491 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 TEAD2Q15562 447 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 SPIN4Q56A73 249 aa14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 ZBED6CLQ96FA7 236 aaPredicted RBP14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 ZNF514Q96K75 400 aaPredicted RBP14.27□□□□□ -0.12
SLC6A20-202ENST00000358525 SNPHO15079 494 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 C9P02748 559 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 RAPSNQ13702 412 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 NPTX1Q15818 432 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 CARTPTQ16568 116 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 RTP2Q5QGT7 225 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 ANKRD26P1Q6NSI1 321 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 ERI1Q8IV48 349 aaKnown RBP14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 HDDC3Q8N4P3 179 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 GPATCH1Q9BRR8 931 aaKnown RBP14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 ABCB9Q9NP78 766 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 TDP1Q9NUW8 608 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 TMED5Q9Y3A6 229 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 PTX3P26022 381 aaPredicted RBP14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 PREPP48147 710 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 ATP13A5Q4VNC0 1218 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 PRAMEF14Q5SWL7 426 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 PRAMEF13Q5VWM6 474 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 CXXC5Q7LFL8 322 aaKnown RBP14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 PEX13Q92968 403 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 R3HDMLQ9H3Y0 253 aa14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 LIN28AQ9H9Z2 209 aaKnown RBP14.27□□□□□ -0.13
SLC6A20-202ENST00000358525 TAF4O00268 1085 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 GBAP04062 536 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 LAMP2P13473 410 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 IL7RP16871 459 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 C1QTNF8P60827 252 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 PRR5P85299 388 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 MXD1Q05195 221 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 PTGR1Q14914 329 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 OXR1Q8N573 874 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 STON2Q8WXE9 905 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 PYURFQ96I23 114 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 ITM2CQ9NQX7 267 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 RWDD3Q9Y3V2 267 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 FAM86C2PA6NEL3 165 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 ACP5P13686 325 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 ZNF30P17039 623 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 STK19P49842 368 aaPredicted RBP14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 ALDH3A2P51648 485 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 ZNF155Q12901 538 aaPredicted RBP14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 TARDBPQ13148 414 aaKnown RBP eCLIP14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 LAPTM4AQ15012 233 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 ZNF789Q5FWF6 425 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 AGTRAPQ6RW13 159 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 TVP23BQ9NYZ1 205 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 MRPS33Q9Y291 106 aaKnown RBP14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 WBP11Q9Y2W2 641 aaKnown RBP14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 PCDHGB3Q9Y5G1 929 aa14.26□□□□□ -0.13
SLC6A20-202ENST00000358525 LOC100130705A0A1B0GUX0 176 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms