RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 PRSS42Q7Z5A4 293 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 FAM129CQ86XR2 697 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 RIBC1Q8N443 379 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 SLC22A18Q96BI1 424 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 RHBDF1Q96CC6 855 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 CABS1Q96KC9 395 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 CD180Q99467 661 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 PITPNM3Q9BZ71 974 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 OCIAD1Q9NX40 245 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 CPSF2Q9P2I0 782 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 XPR1Q9UBH6 696 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 SATB2Q9UPW6 733 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 LOXL2Q9Y4K0 774 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 ZNF839A8K0R7 811 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TK2O00142 265 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 NRP2O60462 931 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 COL6A2P12110 1019 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 MTHFD2P13995 350 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 MAGP20916 626 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 CSTF2P33240 577 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TRA2AQ13595 282 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 ZIC1Q15915 447 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 PTCHD3Q3KNS1 767 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TECRLQ5HYJ1 363 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 CDHR3Q6ZTQ4 885 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 SRRM1Q8IYB3 904 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 CACTIN-AS1Q8N1I8 211 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 OR2L3Q8NG85 312 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 ACMSDQ8TDX5 336 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 LIN37Q96GY3 246 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TSNARE1Q96NA8 513 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TRAPPC9Q96Q05 1148 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 C12orf65Q9H3J6 166 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 ZNF768Q9H5H4 540 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 CCDC177Q9NQR7 707 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 C1GALT1Q9NS00 363 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 INTS7Q9NVH2 962 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 SOHLH2Q9NX45 425 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TMEM216Q9P0N5 145 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 SH2B3Q9UQQ2 575 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 PCDHB11Q9Y5F2 797 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 FREM2Q5SZK8 3169 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 A0A0J9YY10 115 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TAPBPO15533 448 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 ANKRD34CP0C6C1 535 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 CDKL1Q00532 357 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 CAMK2BQ13554 666 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TSNAXIP1Q2TAA8 658 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 TRABD2AQ86V40 505 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 AGBL5Q8NDL9 886 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 RHEBL1Q8TAI7 183 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 ATL1Q8WXF7 558 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 KLHL6Q8WZ60 621 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 RNF31Q96EP0 1072 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 CMKLR1Q99788 373 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 ARGLU1Q9NWB6 273 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 ASB1Q9Y576 335 aa17.23■□□□□ 0.35
PDLIM7-202ENST00000355841 CCDC187A0A096LP49 1063 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 EFCAB7A8K855 629 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 TMX2-CTNND1H3BSU7 103 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 HGSO14964 777 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 TOX3O15405 576 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 ZBTB11O95625 1053 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 FGF3P11487 239 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 NELFEP18615 380 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 ETV5P41161 510 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 GRIA3P42263 894 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 HSPA7P48741 367 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 ARL4DP49703 201 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 AGTR2P50052 363 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 SLC5A12Q1EHB4 618 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 PRAMEF13Q5VWM6 474 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 FBXO39Q8N4B4 442 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 OR56A3Q8NH54 315 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 SLC41A2Q96JW4 573 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 OR4K3Q96R72 315 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 TMEM79Q9BSE2 394 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 SGPP1Q9BX95 441 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 FAM60AQ9NP50 221 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 SLC6A20Q9NP91 592 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 WWOXQ9NZC7 414 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 SEMA5BQ9P283 1151 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 PISDQ9UG56 409 aa17.22■□□□□ 0.35
PDLIM7-202ENST00000355841 IGKV1-8A0A0C4DH67 115 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 PLD2O14939 933 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 RGS16O15492 202 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 S100BP04271 92 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 SBK3P0C264 359 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 EBLN1P0CF75 366 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 FOLR1P15328 257 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 CREB1P16220 341 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 HNMTP50135 292 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 HSD11B2P80365 405 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 COL9A2Q14055 689 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 PFKFB4Q16877 469 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 ICE2Q659A1 982 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 CAPN13Q6MZZ7 669 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 LRIG3Q6UXM1 1119 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 TMEM151AQ8N4L1 468 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 C19orf47Q8N9M1 422 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms