RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PTK6Q13882 451 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 NKAIN1Q4KMZ8 207 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 HSP90AA5PQ58FG0 334 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 HP1BP3Q5SSJ5 553 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 RBM20Q5T481 1227 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 TTLL10Q6ZVT0 673 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 PIWIL4Q7Z3Z4 852 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 LRRC56Q8IYG6 542 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 CPNE9Q8IYJ1 553 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 AMER2Q8N7J2 671 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 FDCSPQ8NFU4 85 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 OR9A1PQ8NGU1 263 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 NDNQ99608 321 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 GPR21Q99679 349 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 CLMPQ9H6B4 373 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 IARS2Q9NSE4 1012 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 INTS10Q9NVR2 710 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 ANAPC2Q9UJX6 822 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 FBXO5Q9UKT4 447 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 PLAAQ9Y263 795 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 PTRH2Q9Y3E5 179 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 AP1M2Q9Y6Q5 423 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 FAM169AQ9Y6X4 670 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 OR2A25A4D2G3 310 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 CTAGE9A4FU28 777 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 MYO1CO00159 1063 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 CES2O00748 559 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 ZSCAN12O43309 604 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 PAMP19021 973 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 DEKP35659 375 aaKnown RBP16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 VSX2P58304 361 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 DCDP81605 110 aaKnown RBP16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 FOXK1P85037 733 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 KCNC4Q03721 635 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 THOC5Q13769 683 aaKnown RBP16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 CRYMQ14894 314 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 LONRF1Q17RB8 773 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 FBXO42Q6P3S6 717 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 TLDC1Q6P9B6 456 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 SHISA6Q6ZSJ9 500 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 RNF44Q7L0R7 432 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 PPP1R32Q7Z5V6 425 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 MRGPREQ86SM8 312 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 ZNF480Q8WV37 535 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 SLC25A23Q9BV35 468 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 ACSS2Q9NR19 701 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 IRAK4Q9NWZ3 460 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 SPATA7Q9P0W8 599 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 IFT80Q9P2H3 777 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 ADAMTS6Q9UKP5 1117 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 DHRS7Q9Y394 339 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 KLK4Q9Y5K2 254 aa16.02■□□□□ 0.16
PDLIM7-201ENST00000355572 NBASA2RRP1 2371 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 A6NL46 340 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 E5RI56 91 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 H3BMM5 538 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 MAP3K7O43318 606 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 KDM1AO60341 852 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 HBQ1P09105 142 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 AGXTP21549 392 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 OR1D4P47884 311 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 CD97P48960 835 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 MRPS25P82663 173 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 SRSF1Q07955 248 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 KLRB1Q12918 225 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 PPP1R7Q15435 360 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 PRR30Q53SZ7 412 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 PAPD7Q5XG87 772 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 MBOAT1Q6ZNC8 495 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 KCNMB4Q86W47 210 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 KLHL7Q8IXQ5 586 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 PROKR1Q8TCW9 393 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 SLCO2A1Q92959 643 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 SLC22A18Q96BI1 424 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 C10orf90Q96M02 699 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 NAP1L3Q99457 506 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 SPSB2Q99619 263 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 DPH2Q9BQC3 489 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 AARSD1Q9BTE6 412 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 DPH7Q9BTV6 452 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 ENAMQ9NRM1 1142 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 CUTCQ9NTM9 273 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 CUEDC1Q9NWM3 386 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 LUZP4Q9P127 313 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 CTSFQ9UBX1 484 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 ASIC3Q9UHC3 531 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 SH2B3Q9UQQ2 575 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 UBR5O95071 2799 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 SCN2AQ99250 2005 aa16.01■□□□□ 0.15
PDLIM7-201ENST00000355572 MAGEB16A2A368 324 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 FITM1A5D6W6 292 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 C9J4A7 227 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 SLC16A8O95907 504 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 ALAS2P22557 587 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 CCNFP41002 786 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 ZXDCQ2QGD7 858 aaPredicted RBP16■□□□□ 0.15
PDLIM7-201ENST00000355572 WASHC2DQ5SRD0 308 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 ARMC3Q5W041 872 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms