RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 AURKAO14965 403 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 IFNA2P01563 188 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 MTPNP58546 118 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 E2F1Q01094 437 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 RBM48Q5RL73 367 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 POLR2J3Q9H1A7 115 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDHB16Q9NRJ7 776 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ALOX15BO15296 676 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PEPDP12955 493 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 GNRHRP30968 328 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TAS2R40P59535 323 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 IQCCQ4KMZ1 466 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 APOBEC3HQ6NTF7 200 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 DPAGT1Q9H3H5 408 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TM9SF3Q9HD45 589 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 DDX4Q9NQI0 724 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 REREQ9P2R6 1566 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PSMD10O75832 226 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 HRGP04196 525 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ADRA1BP35368 520 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 OR2B6P58173 313 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 GANABQ14697 944 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 OR5J2Q8NH18 312 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ASB12Q8WXK4 309 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 LRTOMTQ8WZ04 291 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 MAP1BP46821 2468 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 A0A1W2PRB8 838 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TOR1BO14657 336 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PDYNP01213 254 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 VAMP1P23763 118 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 YBEYP58557 167 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 HERC3Q15034 1050 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 NTRK3Q16288 839 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 COQ8AQ8NI60 647 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 NMUR2Q9GZQ4 415 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 OR2AG1Q9H205 316 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 THUMPD1Q9NXG2 353 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 IL36AQ9UHA7 158 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDHGA6Q9Y5G7 932 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 A0A1B0GVI7 797 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TGFB1P01137 390 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 NUDT17P0C025 328 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 MRPL49Q13405 166 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ZACNQ401N2 412 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 FUT10Q6P4F1 479 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TOMM5Q8N4H5 51 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 OR4C15Q8NGM1 316 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 GEMIN6Q8WXD5 167 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF180Q9UJW8 692 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SNX10Q9Y5X0 201 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 A0A1B0GVM2 712 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ZER1Q7Z7L7 766 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 C12orf40Q86WS4 652 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 THRSPQ92748 146 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 MAGEE1Q9HCI5 957 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TEX13DA0A0J9YY54 714 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PBX3P40426 434 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF649Q9BS31 505 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 LHX5Q9H2C1 402 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PIP5K1BO14986 540 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 NDUFS4O43181 175 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 IRF2P14316 349 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 DDR1Q08345 913 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ADGRA1Q86SQ6 560 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 RBM15BQ8NDT2 890 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TMIEQ8NEW7 156 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 OR7D4Q8NG98 312 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 STOML3Q8TAV4 291 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 COL21A1Q96P44 957 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 MTERF1Q99551 399 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 WDR26Q9H7D7 661 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 GNG8Q9UK08 70 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PRKCIP41743 596 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SMSP52788 366 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 CLRN1P58418 232 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 GAD2Q05329 585 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 COMTD1Q86VU5 262 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SPATA22Q8NHS9 363 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 DUSP26Q9BV47 211 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 CDC42BPBQ9Y5S2 1711 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SYN3O14994 580 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 HOXB9P17482 250 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PTPN2P17706 415 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 C9orf43Q8TAL5 461 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TMEM41AQ96HV5 264 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 NPLQ9BXD5 320 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC25A51Q9H1U9 297 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 C1orf109Q9NX04 203 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 NEXMIFQ5QGS0 1516 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 CCDC163A0A0D9SF12 145 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 A8MUI8 341 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SYNGR4O95473 234 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ACP5P13686 325 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 DGKGP49619 791 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 CMKLR1Q99788 373 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 NIFKQ9BYG3 293 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ZCCHC3Q9NUD5 404 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDHB3Q9Y5E6 796 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SMIM35A0A1B0GVV1 85 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 AGPSO00116 658 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms