RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 THEMIS2Q5TEJ8 643 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 PRAMEF9Q5VWM5 478 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 LIPJQ5W064 366 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 IYDQ6PHW0 289 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 YTHDF3Q7Z739 585 aaKnown RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 C2orf73Q8N5S3 287 aaPredicted RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 SMPDL3AQ92484 453 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 NEIL2Q969S2 332 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 NRTNQ99748 197 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 SLC29A3Q9BZD2 475 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 DYRK1BQ9Y463 629 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 DMDP11532 3685 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 TRBV23OR9-2A0A075B6M9 112 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 FFAR3O14843 346 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 GPR42O15529 346 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 UBOX5O94941 541 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 ELOCQ15369 112 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 PRAMEF14Q5SWL7 426 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 PRAMEF13Q5VWM6 474 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 IL27RAQ6UWB1 636 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 LCTLQ6UWM7 567 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 LARP4Q71RC2 724 aaKnown RBP eCLIP15.09■□□□□ 0.014e-10■■■□□ 14.8
CTSA-202ENST00000354880 LINC01555Q8NAE3 123 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 PRR11Q96HE9 360 aaPredicted RBP15.09■□□□□ 0.01
CTSA-202ENST00000354880 SAR1AQ9NR31 198 aa15.09■□□□□ 0.01
CTSA-202ENST00000354880 KCNE1BA0A087WTH5 132 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 OR5K4A6NMS3 321 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 VPS4BO75351 444 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 ULK1O75385 1050 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 KIAA0754O94854 1291 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 KRT6AP02538 564 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 KRT6BP04259 564 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 JUPP14923 745 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 PKLRP30613 574 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 KRT6CP48668 564 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 HTR6P50406 440 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 DOC2AQ14183 400 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 ABRAXAS2Q15018 415 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 TEAD4Q15561 434 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 XKR7Q5GH72 579 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 SCIMPQ6UWF3 145 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 FBXL6Q8N531 539 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 OR2L8Q8NGY9 312 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 HMGCLL1Q8TB92 370 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 SH3KBP1Q96B97 665 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 TUBGCP3Q96CW5 907 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 HAUS8Q9BT25 410 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 PCBD2Q9H0N5 130 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 XKR8Q9H6D3 395 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 AKTIPQ9H8T0 292 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 ARMCX1Q9P291 453 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 SNX6Q9UNH7 406 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 ICKQ9UPZ9 632 aa15.08■□□□□ 0.01
CTSA-202ENST00000354880 ATXN2Q99700 1313 aaKnown RBP15.08■□□□□ 0
CTSA-202ENST00000354880 KIR2DS5A0A0G2JLQ3 304 aa15.08■□□□□ 0
CTSA-202ENST00000354880 A0A0G2JNG1 304 aa15.08■□□□□ 0
CTSA-202ENST00000354880 PRR5-ARHGAP8B1AHC4 643 aa15.08■□□□□ 0
CTSA-202ENST00000354880 KIR2DS3K7RE56 304 aa15.08■□□□□ 0
CTSA-202ENST00000354880 MANBAO00462 879 aa15.08■□□□□ 0
CTSA-202ENST00000354880 SLC2A4P14672 509 aa15.08■□□□□ 0
CTSA-202ENST00000354880 GNSP15586 552 aa15.08■□□□□ 0
CTSA-202ENST00000354880 XRCC1P18887 633 aaPredicted RBP15.08■□□□□ 0
CTSA-202ENST00000354880 HNF4AP41235 474 aa15.08■□□□□ 0
CTSA-202ENST00000354880 CASP2P42575 452 aa15.08■□□□□ 0
CTSA-202ENST00000354880 HNRNPKP61978 463 aaKnown RBP eCLIP15.08■□□□□ 01e-14■■□□□ 14.4
CTSA-202ENST00000354880 E2F2Q14209 437 aa15.08■□□□□ 0
CTSA-202ENST00000354880 KIR2DS5Q14953 304 aa15.08■□□□□ 0
CTSA-202ENST00000354880 ZRSR2Q15696 482 aaKnown RBP15.08■□□□□ 0
CTSA-202ENST00000354880 TBCCQ15814 346 aa15.08■□□□□ 0
CTSA-202ENST00000354880 PLK5Q496M5 336 aa15.08■□□□□ 0
CTSA-202ENST00000354880 GALNTL6Q49A17 601 aa15.08■□□□□ 0
CTSA-202ENST00000354880 TMEM198Q66K66 360 aa15.08■□□□□ 0
CTSA-202ENST00000354880 SLCO4C1Q6ZQN7 724 aa15.08■□□□□ 0
CTSA-202ENST00000354880 RNF165Q6ZSG1 346 aa15.08■□□□□ 0
CTSA-202ENST00000354880 TMPRSS11BQ86T26 416 aa15.08■□□□□ 0
CTSA-202ENST00000354880 TRIM48Q8IWZ4 208 aa15.08■□□□□ 0
CTSA-202ENST00000354880 FAM46DQ8NEK8 389 aa15.08■□□□□ 0
CTSA-202ENST00000354880 SLC5A11Q8WWX8 675 aa15.08■□□□□ 0
CTSA-202ENST00000354880 HBEGFQ99075 208 aa15.08■□□□□ 0
CTSA-202ENST00000354880 SPASTQ9UBP0 616 aa15.08■□□□□ 0
CTSA-202ENST00000354880 TAC3Q9UHF0 121 aa15.08■□□□□ 0
CTSA-202ENST00000354880 SH2B3Q9UQQ2 575 aa15.08■□□□□ 0
CTSA-202ENST00000354880 A0A1B0GTW7 788 aa15.07■□□□□ 0
CTSA-202ENST00000354880 A0A1W2PPV9 198 aa15.07■□□□□ 0
CTSA-202ENST00000354880 HRO43593 1189 aa15.07■□□□□ 0
CTSA-202ENST00000354880 VIPP01282 170 aa15.07■□□□□ 0
CTSA-202ENST00000354880 CD22P20273 847 aa15.07■□□□□ 0
CTSA-202ENST00000354880 UBAP2LQ14157 1087 aaKnown RBP15.07■□□□□ 0
CTSA-202ENST00000354880 FAM91A1Q658Y4 838 aa15.07■□□□□ 0
CTSA-202ENST00000354880 ATG9BQ674R7 924 aa15.07■□□□□ 0
CTSA-202ENST00000354880 GRHL2Q6ISB3 625 aa15.07■□□□□ 0
CTSA-202ENST00000354880 BMP8AQ7Z5Y6 402 aa15.07■□□□□ 0
CTSA-202ENST00000354880 GKN2Q86XP6 184 aa15.07■□□□□ 0
CTSA-202ENST00000354880 NAGSQ8N159 534 aa15.07■□□□□ 0
CTSA-202ENST00000354880 LMX1AQ8TE12 382 aa15.07■□□□□ 0
CTSA-202ENST00000354880 LCN9Q8WX39 176 aa15.07■□□□□ 0
CTSA-202ENST00000354880 PATE1Q8WXA2 126 aa15.07■□□□□ 0
CTSA-202ENST00000354880 USP7Q93009 1102 aa15.07■□□□□ 0
CTSA-202ENST00000354880 PTCD3Q96EY7 689 aaKnown RBP15.07■□□□□ 0
CTSA-202ENST00000354880 ACAT2Q9BWD1 397 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms