RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 CEBPBP17676 345 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 AGTR2P50052 363 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 OR4F3Q6IEY1 312 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 ZCCHC7Q8N3Z6 543 aaKnown RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 SLC38A4Q969I6 547 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 FAM83CQ9BQN1 747 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CLSTN3Q9BQT9 956 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 OR51B5Q9H339 312 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 SPATA6Q9NWH7 488 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 LEPRP48357 1165 aaKnown RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 PSAPL1Q6NUJ1 521 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 PARP8Q8N3A8 854 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 FAM47BQ8NA70 645 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 OR2M4Q96R27 311 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 FADS3Q9Y5Q0 445 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 PLK4O00444 970 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 MAN2B1O00754 1011 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 DNAJB1P25685 340 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 COX10Q12887 443 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 ARMC4Q5T2S8 1044 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 RELTQ969Z4 430 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 DENND2DQ9H6A0 471 aaPredicted RBP14.52□□□□□ -0.08
COL17A1-201ENST00000353479 XKR8Q9H6D3 395 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 CLCA3PQ9Y6N3 262 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 MYO9BQ13459 2157 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 SLC22A2O15244 555 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 GBAP04062 536 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 CDH1P12830 882 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 FOSL2P15408 326 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 POLR2CP19387 275 aaPredicted RBP14.52□□□□□ -0.08
COL17A1-201ENST00000353479 DGKQP52824 942 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 PSMD4P55036 377 aaKnown RBP14.52□□□□□ -0.08
COL17A1-201ENST00000353479 RPS13P62277 151 aaKnown RBP14.52□□□□□ -0.08
COL17A1-201ENST00000353479 MYBPC1Q00872 1141 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 RANBP3LQ86VV4 465 aaPredicted RBP14.52□□□□□ -0.08
COL17A1-201ENST00000353479 PHOSPHO2Q8TCD6 241 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 DNAAF2Q9NVR5 837 aaKnown RBP14.52□□□□□ -0.08
COL17A1-201ENST00000353479 ERVK-11Q9UQG0 969 aa14.52□□□□□ -0.08
COL17A1-201ENST00000353479 UGT2B11O75310 529 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 MFN2O95140 757 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 NTSR1P30989 418 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 SLC18A1P54219 525 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 KRR1Q13601 381 aaKnown RBP14.52□□□□□ -0.09
COL17A1-201ENST00000353479 CST6Q15828 149 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 LRTOMTQ8WZ04 291 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 RBM4BQ9BQ04 359 aaKnown RBP14.52□□□□□ -0.09
COL17A1-201ENST00000353479 RBM4Q9BWF3 364 aaKnown RBP14.52□□□□□ -0.09
COL17A1-201ENST00000353479 NUAK2Q9H093 628 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 POPDC3Q9HBV1 291 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 FADS2P1A8MWK0 482 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 GPIP06744 558 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 GGT5P36269 586 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 MEF2AQ02078 507 aaPredicted RBP14.52□□□□□ -0.09
COL17A1-201ENST00000353479 ZNF57Q68EA5 555 aaPredicted RBP14.52□□□□□ -0.09
COL17A1-201ENST00000353479 JAZF1Q86VZ6 243 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 ARL10Q8N8L6 244 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 SLC35A5Q9BS91 424 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 NDC1Q9BTX1 674 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 ACSL5Q9ULC5 683 aa14.52□□□□□ -0.09
COL17A1-201ENST00000353479 EBLN1P0CF75 366 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 MED22Q15528 200 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 SNAPC1Q16533 368 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-201ENST00000353479 RELL1Q8IUW5 271 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL17A1-201ENST00000353479 CHST14Q8NCH0 376 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 WDR92Q96MX6 357 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 CDCA3Q99618 268 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-201ENST00000353479 OSBPL7Q9BZF2 842 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 EPB41L1Q9H4G0 881 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 MARCH4Q9P2E8 410 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-201ENST00000353479 CDH7Q9ULB5 785 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 GRXCR1A8MXD5 290 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 IFI44LQ53G44 452 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 ZNF678Q5SXM1 525 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 SLC8B1Q6J4K2 584 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 FZD3Q9NPG1 666 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 MAPK15Q8TD08 544 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 RANBP9Q96S59 729 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 C8orf33Q9H7E9 229 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-201ENST00000353479 UTS2RQ9UKP6 389 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 GOLGA4Q13439 2230 aaKnown RBP14.51□□□□□ -0.09
COL17A1-201ENST00000353479 C6P13671 934 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 POU2F1P14859 743 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 CRISP3P54108 245 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 HYAL2Q12891 473 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 DLG1Q12959 904 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 MAPK11Q15759 364 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 LRRC26Q2I0M4 334 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 SPANXN2Q5MJ10 180 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 MRPL43Q8N983 215 aaKnown RBP14.51□□□□□ -0.09
COL17A1-201ENST00000353479 PEX13Q92968 403 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 PAIP1Q9H074 479 aaKnown RBP14.51□□□□□ -0.09
COL17A1-201ENST00000353479 CTPS2Q9NRF8 586 aa14.51□□□□□ -0.09
COL17A1-201ENST00000353479 STX16-NPEPL1H3BU86 382 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 STX16O14662 325 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ADAMDEC1O15204 470 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 MID1O15344 667 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ADAM12O43184 909 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 KIF1CO43896 1103 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms