RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 CTDSP2O14595 271 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 TFECO14948 347 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 ANKRD28O15084 1053 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 DIRAS1O95057 198 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 GLP2RO95838 553 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 ELNP15502 786 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 RHOQP17081 205 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 EFNA1P20827 205 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 HOXA9P31269 272 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 RRM2P31350 389 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 HTR2BP41595 481 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 YIF1BQ5BJH7 314 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 KDM4DQ6B0I6 523 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 IL27RAQ6UWB1 636 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 PRR23CQ6ZRP0 262 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 GPRIN3Q6ZVF9 776 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 FAM20CQ8IXL6 584 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 MSRB3Q8IXL7 192 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 C10orf111Q8N326 155 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 TP53I13Q8NBR0 393 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 ANGPTL6Q8NI99 470 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 SLC13A3Q8WWT9 602 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 RNF170Q96K19 258 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 PPP1R2P1Q96PQ5 205 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 BEX2Q9BXY8 128 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 RANGRFQ9HD47 186 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 HEBP1Q9NRV9 189 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 SCN10AQ9Y5Y9 1956 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 SLC12A8A0AV02 714 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 CD3EAPO15446 510 aaKnown RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 IGHA2P01877 340 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 KRT6AP02538 564 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 KRT6BP04259 564 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 RPLP0P05388 317 aaKnown RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 CCND3P30281 292 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 C19orf57Q0VDD7 668 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 DSC3Q14574 896 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 PTGR1Q14914 329 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 NR6A1Q15406 480 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 GPR149Q86SP6 731 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 MON1AQ86VX9 555 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 TSPYL5Q86VY4 417 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 ZDHHC21Q8IVQ6 265 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 NATD1Q8N6N6 113 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 FUBP1Q96AE4 644 aaKnown RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 B3GALT6Q96L58 329 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 OR2A14Q96R47 310 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 KCNS3Q9BQ31 491 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 CHCHD6Q9BRQ6 235 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 COPS4Q9BT78 406 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 TMEM248Q9NWD8 314 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 ABCG2Q9UNQ0 655 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 SATB2Q9UPW6 733 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 PRG3Q9Y2Y8 225 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-202ENST00000348987 SNX8Q9Y5X2 465 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 LYVE1Q9Y5Y7 322 aa18.18■□□□□ 0.5
SCARF1-202ENST00000348987 PNMA8CA0A1B0GUJ8 204 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 LINC00854A0A1B0GVQ3 168 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 NPEPPSL1A6NEC2 478 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 MANSC4A6NHS7 340 aaPredicted RBP18.17■□□□□ 0.5
SCARF1-202ENST00000348987 CYP7B1O75881 506 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 MLYCDO95822 493 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 UBL4AP11441 157 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 CYP2A7P20853 494 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 MAGEA11P43364 429 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 APH1BQ8WW43 257 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 IPCEF1Q8WWN9 437 aaPredicted RBP18.17■□□□□ 0.5
SCARF1-202ENST00000348987 PYURFQ96I23 114 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 EIF2B4Q9UI10 523 aaKnown RBP18.17■□□□□ 0.5
SCARF1-202ENST00000348987 A0A0X1KG70 313 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 LOC285095A0A1B0GVY8 99 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 UBA6A0AVT1 1052 aaPredicted RBP18.17■□□□□ 0.5
SCARF1-202ENST00000348987 FAM25AB3EWG3 89 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 FAM25CB3EWG5 89 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 FAM25GB3EWG6 89 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 TLL1O43897 1013 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 CYBAP13498 195 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 SUOXP51687 545 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 ERVPABLB-1P60509 514 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 IRF3Q14653 427 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 KIAA0040Q15053 153 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 KCNA10Q16322 511 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 MAPKAPK3Q16644 382 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 DUSP7Q16829 419 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 PROX2Q3B8N5 592 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 FAM174BQ3ZCQ3 159 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 SLC46A3Q7Z3Q1 461 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 VN1R5Q7Z5H4 357 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 CCDC190Q86UF4 302 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 NOXA1Q86UR1 476 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 RAB43Q86YS6 212 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 OR56A4Q8NGH8 313 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 COQ7Q99807 217 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 TNKS2Q9H2K2 1166 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 MAGIXQ9H6Y5 334 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 TOR4AQ9NXH8 423 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 NOD1Q9Y239 953 aa18.17■□□□□ 0.5
SCARF1-202ENST00000348987 MEIOCA2RUB1 952 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 ARHGAP33O14559 1287 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 SEC22BO75396 215 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms