RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 PIGNO95427 931 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 PRLP01236 227 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 ATXN1LP0C7T5 689 aaKnown RBP5.05□□□□□ -1.6
VCAM1-202ENST00000347652 APEHP13798 732 aaKnown RBP5.05□□□□□ -1.6
VCAM1-202ENST00000347652 AGAP20933 346 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 SERPINA4P29622 427 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 CD6P30203 668 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 NTF4P34130 210 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 GRIA1P42261 906 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 PTGER3P43115 390 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 CXCL12P48061 93 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 RAC3P60763 192 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 TAP2Q03519 686 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 RAD51Q06609 339 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 CDK18Q07002 472 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 POU4F2Q12837 409 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 CUL1Q13616 776 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 ELAVL3Q14576 367 aaKnown RBP5.05□□□□□ -1.6
VCAM1-202ENST00000347652 CEBPEQ15744 281 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 PCSK7Q16549 785 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 LPAL2Q16609 132 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 MEP1BQ16820 701 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 PCGF3Q3KNV8 242 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 SMUG1Q53HV7 270 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 ANO7Q6IWH7 933 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 LRRC8BQ6P9F7 803 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 LINC00523Q86TU6 105 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 MCATQ8IVS2 390 aaKnown RBP5.05□□□□□ -1.6
VCAM1-202ENST00000347652 HDDC3Q8N4P3 179 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 POU5F2Q8N7G0 328 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 EIF1ADQ8N9N8 165 aaKnown RBP5.05□□□□□ -1.6
VCAM1-202ENST00000347652 IFT81Q8WYA0 676 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 ECHDC3Q96DC8 303 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 HS6ST2Q96MM7 605 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 SRSF8Q9BRL6 282 aaKnown RBP5.05□□□□□ -1.6
VCAM1-202ENST00000347652 RTKNQ9BST9 563 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 FICDQ9BVA6 458 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 OSBPL1AQ9BXW6 950 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 TPSD1Q9BZJ3 242 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 TWSG1Q9GZX9 223 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 MVB12BQ9H7P6 319 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 GFOD1Q9NXC2 390 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 IL19Q9UHD0 177 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 SARDHQ9UL12 918 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 BAG5Q9UL15 447 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 PADI1Q9ULC6 663 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 SHOC2Q9UQ13 582 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 CHKBQ9Y259 395 aa5.05□□□□□ -1.6
VCAM1-202ENST00000347652 RIF1Q5UIP0 2472 aaKnown RBP5.05□□□□□ -1.6
VCAM1-202ENST00000347652 NUMA1Q14980 2115 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 GOLGA8MH3BSY2 632 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 E2F3O00716 465 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 USP12O75317 370 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 NME6O75414 186 aaPredicted RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PGLSO95336 258 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PLGP00747 810 aaPredicted RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PRNPP04156 253 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 MLNP12872 115 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 HOXB2P14652 356 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CA4P22748 312 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 JAK1P23458 1154 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 MAGEA3P43357 314 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 SARNPP82979 210 aaKnown RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CALCOCO2Q13137 446 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 MSLNQ13421 630 aaPredicted RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 NR0B2Q15466 257 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 SLC1A5Q15758 541 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CRY1Q16526 586 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 KHDC1LQ5JSQ8 128 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 SIRPB2Q5JXA9 342 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 FNBP1LQ5T0N5 605 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ARMC12Q5T9G4 340 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CCNI2Q6ZMN8 369 aaPredicted RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ZSWIM9Q86XI8 627 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ZCCHC9Q8N567 271 aaKnown RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 SLC15A4Q8N697 577 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 MDGA1Q8NFP4 955 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 OR52K1Q8NGK4 314 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 OR2T3Q8NH03 318 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 FBXO25Q8TCJ0 367 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PIH1D2Q8WWB5 315 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 RLN3Q8WXF3 142 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 NCLNQ969V3 563 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ATP6V1G3Q96LB4 118 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 KLHL32Q96NJ5 620 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 SERPINB12Q96P63 405 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 INSM2Q96T92 566 aaPredicted RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PARD6BQ9BYG5 372 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 FRMD8Q9BZ67 464 aaPredicted RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PCDHAC1Q9H158 963 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CDIP1Q9H305 208 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 RUBCNLQ9H714 662 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ZFAND3Q9H8U3 227 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 SERINC1Q9NRX5 453 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 GPR27Q9NS67 375 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 RAB21Q9UL25 225 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PSME2Q9UL46 239 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PPIL1Q9Y3C6 166 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 TEX264Q9Y6I9 313 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CAPN7Q9Y6W3 813 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms