RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 DNASE1L3Q13609 305 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 ZNF789Q5FWF6 425 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 TUBA1AQ71U36 451 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 CNTN4Q8IWV2 1026 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 CHERPQ8IWX8 916 aaKnown RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 ZNF655Q8N720 491 aaPredicted RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 TNKS2Q9H2K2 1166 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 CCSER2Q9H7U1 834 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 RUVBL1Q9Y265 456 aaKnown RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 ST14Q9Y5Y6 855 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 A0A1B0GW55 424 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 ANKRD66B4E2M5 251 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 AP1G1O43747 822 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 IFNW1P05000 195 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 DUX4L2P0CJ85 424 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 DUX4L3P0CJ86 424 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 DUX4L4P0CJ87 422 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 DUX4L5P0CJ88 424 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 DUX4L6P0CJ89 424 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 DUX4L7P0CJ90 424 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 PRKAR1AP10644 381 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 EFNA1P20827 205 aaPredicted RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 FOXB2Q5VYV0 432 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 SH2D5Q6ZV89 423 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 NCCRP1Q6ZVX7 275 aaPredicted RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 TMPRSS11BQ86T26 416 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 SH3RF2Q8TEC5 729 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 GTPBP3Q969Y2 492 aaKnown RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 DUSP26Q9BV47 211 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 RPRD1BQ9NQG5 326 aaKnown RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 PHPT1Q9NRX4 125 aaPredicted RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 DUX4Q9UBX2 424 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 SLC9A8Q9Y2E8 581 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 NR2F1P10589 423 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 FPR1P21462 350 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 GPX3P22352 226 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 GABARAPL2P60520 117 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 NAE1Q13564 534 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 CAPN13Q6MZZ7 669 aaPredicted RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 CDK20Q8IZL9 346 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 LILRA2Q8N149 483 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 OSBPL10Q9BXB5 764 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 TPK1Q9H3S4 243 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 RMI1Q9H9A7 625 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 AGPAT4Q9NRZ5 378 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 GULP1Q9UBP9 304 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 TNFRSF21O75509 655 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 JUNP05412 331 aaKnown RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 RB1P06400 928 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 HNRNPA1P09651 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
NUP50-201ENST00000347635 PORP16435 677 aaPredicted RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 GGT5P36269 586 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 PIGFQ07326 219 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 OR4F3Q6IEY1 312 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.39□□□□□ -0.11
NUP50-201ENST00000347635 ZFAND4Q86XD8 727 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 OR10Q1Q8NGQ4 319 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 KCNC2Q96PR1 638 aa14.39□□□□□ -0.11
NUP50-201ENST00000347635 LOC730098B7Z3J9 87 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 ITGBL1O95965 494 aaPredicted RBP14.38□□□□□ -0.11
NUP50-201ENST00000347635 POU2F1P14859 743 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 GSTM2P28161 218 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 SLC5A2P31639 672 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 ERVK-21P61565 698 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 BNC1Q01954 994 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 ABHD18Q0P651 414 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 LYSMD3Q7Z3D4 306 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 TMCO6Q96DC7 493 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 TOX2Q96NM4 488 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 CNPPD1Q9BV87 410 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 NSUN3Q9H649 340 aaKnown RBP14.38□□□□□ -0.11
NUP50-201ENST00000347635 TM9SF3Q9HD45 589 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 FAM118AQ9NWS6 357 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 AURKAO14965 403 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 UGT2B17O75795 530 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 TIE1P35590 1138 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 GDF5P43026 501 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 PRKAG1P54619 331 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 CARM1Q86X55 608 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 TMEM102Q8N9M5 508 aaPredicted RBP14.38□□□□□ -0.11
NUP50-201ENST00000347635 CNIH3Q8TBE1 160 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 OTUB2Q96DC9 234 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 OMA1Q96E52 524 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 SLC32A1Q9H598 525 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 CERS4Q9HA82 394 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 SDR39U1Q9NRG7 319 aaPredicted RBP14.38□□□□□ -0.11
NUP50-201ENST00000347635 SESN1Q9Y6P5 492 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 FBP2O00757 339 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 ALPIP09923 528 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 EBLN1P0CF75 366 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 ANXA8P13928 327 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 PDGFRLQ15198 375 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 DUOXA1Q1HG43 343 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 TEX47Q8TBZ9 253 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 SLC22A17Q8WUG5 538 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 FLRT1Q9NZU1 646 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 PCDHGB3Q9Y5G1 929 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 HAS3O00219 553 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 HAT1O14929 419 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 KDELR3O43731 214 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms