RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 FADS2O95864 444 aaKnown RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 TBX18O95935 607 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 MOCS2O96007 188 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 FGBP02675 491 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 RPL17P18621 184 aaKnown RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 FMO3P31513 532 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 MAPKAPK2P49137 400 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 YBEYP58557 167 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 TEKQ02763 1124 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 CHRNEQ04844 493 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 ELP6Q0PNE2 266 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 PLD1Q13393 1074 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 TBCEQ15813 527 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 MAPKAPK3Q16644 382 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 COLEC12Q5KU26 742 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.47■□□□□ 0.071e-7■■□□□ 13.3
HMGA1-202ENST00000347617 MLIPQ5VWP3 458 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 CPZQ66K79 652 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 CCBE1Q6UXH8 406 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 VASH1Q7L8A9 365 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 PAF1Q8N7H5 531 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 OR10A6Q8NH74 314 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 GTF2H4Q92759 462 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 CLP1Q92989 425 aaKnown RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 TP53INP1Q96A56 240 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 PLD4Q96BZ4 506 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 ACTL8Q9H568 366 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 C1orf109Q9NX04 203 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 INVSQ9Y283 1065 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 PKP3Q9Y446 797 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 A0A1B0GTL3 188 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 ZW10O43264 779 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 DFNA5O60443 496 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 SEC22BO75396 215 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 VPS26AO75436 327 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 OR4F21O95013 312 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 GJB5O95377 273 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 G6PDP11413 515 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 FPR1P21462 350 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 NR4A2P43354 598 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 CLK3P49761 638 aaKnown RBP15.47■□□□□ 0.07
HMGA1-202ENST00000347617 SEMA3AQ14563 771 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 NR6A1Q15406 480 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 FAM219BQ5XKK7 198 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 CES5AQ6NT32 575 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 PAQR3Q6TCH7 311 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 AFTPHQ6ULP2 937 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 DET1Q7L5Y6 550 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 TMEM179BQ7Z7N9 219 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 GPSM1Q86YR5 675 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 HS3ST5Q8IZT8 346 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 FAM9CQ8IZT9 166 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 METTL4Q8N3J2 472 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 IL17RDQ8NFM7 739 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 GRPEL2Q8TAA5 225 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 NCLNQ969V3 563 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 ERLEC1Q96DZ1 483 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 CEP44Q9C0F1 390 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 RIBC2Q9H4K1 309 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 CCSER2Q9H7U1 834 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 MARCH7Q9H992 704 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 SP110Q9HB58 689 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 PLCXD1Q9NUJ7 323 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 VAPAQ9P0L0 249 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 SLCO3A1Q9UIG8 710 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 YIPF1Q9Y548 306 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 INSL6Q9Y581 213 aa15.47■□□□□ 0.07
HMGA1-202ENST00000347617 OR51F1A6NGY5 319 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 PDZK1P1A8MUH7 402 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 SLC28A1O00337 649 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 E2F3O00716 465 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 MUSKO15146 869 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 TPD52L2O43399 206 aaKnown RBP15.46■□□□□ 0.07
HMGA1-202ENST00000347617 CTSAP10619 480 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 PSMA3P25788 255 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 DNAJA1P31689 397 aaKnown RBP15.46■□□□□ 0.07
HMGA1-202ENST00000347617 DDOSTP39656 456 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.46■□□□□ 0.07
HMGA1-202ENST00000347617 DGCR6Q14129 220 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 PCBP2Q15366 365 aaKnown RBP eCLIP15.46■□□□□ 0.071e-16■■■□□ 16.2
HMGA1-202ENST00000347617 KIAA1614Q5VZ46 1190 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 FBXL22Q6P050 247 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 C16orf59Q7L2K0 433 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 SNX20Q7Z614 316 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 HORMAD1Q86X24 394 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 MIB1Q86YT6 1006 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 PLPP6Q8IY26 295 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 PGBD3Q8N328 593 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 CLIP4Q8N3C7 705 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 METTL6Q8TCB7 284 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 MYDGFQ969H8 173 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 TMCO6Q96DC7 493 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 SLA2Q9H6Q3 261 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 LTB4R2Q9NPC1 389 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 RNF6Q9Y252 685 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 TRAPPC4Q9Y296 219 aa15.46■□□□□ 0.07
HMGA1-202ENST00000347617 NOTOA8MTQ0 251 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 FAM25AB3EWG3 89 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 FAM25CB3EWG5 89 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 FAM25GB3EWG6 89 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms