RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 H0YIV9 168 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 SLC28A1O00337 649 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 FFAR3O14843 346 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 CLGNO14967 610 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 LSM1O15116 133 aaKnown RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 GPR42O15529 346 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 PRICKLE3O43900 615 aaPredicted RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 PEX11AO75192 247 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 RASGRP1O95267 797 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 KRT6AP02538 564 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 KRT6BP04259 564 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 C1GALT1C1LP0DN25 315 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 COX4I1P13073 169 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 TDGF1P13385 188 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 BCKDHBP21953 392 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 GPX3P22352 226 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 CCND1P24385 295 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 MAOBP27338 520 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 PIK3R1P27986 724 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 HNF4AP41235 474 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 SLC19A1P41440 591 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 HALP42357 657 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 KRT6CP48668 564 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 RASSF2P50749 326 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 TBPL1P62380 186 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 RACK1P63244 317 aaKnown RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 RPL6Q02878 288 aaKnown RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 EMX2Q04743 252 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 GRIK2Q13002 908 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 GRHL2Q6ISB3 625 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 DUS1LQ6P1R4 473 aaKnown RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 SUSD1Q6UWL2 747 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 RP9Q8TA86 221 aaKnown RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 WDR20Q8TBZ3 569 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 NEIL2Q969S2 332 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 CMTM5Q96DZ9 223 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 MARK4Q96L34 752 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 TWSG1Q9GZX9 223 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 DUSP15Q9H1R2 295 aaPredicted RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 LRMDAQ9H2I8 198 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 TCEAL2Q9H3H9 227 aaPredicted RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 EHD1Q9H4M9 534 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 CAAP1Q9H8G2 361 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 RIC8BQ9NVN3 520 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 ZNF624Q9P2J8 865 aaPredicted RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 RAPGEFL1Q9UHV5 662 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 ZNF490Q9ULM2 529 aaPredicted RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 PLAGL1Q9UM63 463 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 SNX6Q9UNH7 406 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 TDRKHQ9Y2W6 561 aaKnown RBP10.62□□□□□ -0.71
ECM1-201ENST00000346569 GPR45Q9Y5Y3 372 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 HEBP2Q9Y5Z4 205 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 GON4LQ3T8J9 2241 aa10.62□□□□□ -0.71
ECM1-201ENST00000346569 PRAMEF33A0A0G2JMD5 474 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 LOC100653049A0A140TA62 436 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 ZNF839A8K0R7 811 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 PDZK1P1A8MUH7 402 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 E7EQ34 232 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 KRT34O76011 436 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 PDYNP01213 254 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 THRAP10827 490 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 MTHFD1P11586 935 aaKnown RBP10.61□□□□□ -0.71
ECM1-201ENST00000346569 NDUFS1P28331 727 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 ARL1P40616 181 aaPredicted RBP10.61□□□□□ -0.71
ECM1-201ENST00000346569 ACTR1BP42025 376 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 ACADVLP49748 655 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 ACTR1AP61163 376 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 ERVK-8P63133 956 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 SQLEQ14534 574 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 HERC3Q15034 1050 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 KIAA0040Q15053 153 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 GSTA3Q16772 222 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 XKR6Q5GH73 641 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 FRG2Q64ET8 278 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 ATG9BQ674R7 924 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 IYDQ6PHW0 289 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 NXPE4Q6UWF7 544 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 RINLQ6ZS11 566 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 FUNDC1Q8IVP5 155 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 LINC01555Q8NAE3 123 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 OR2L8Q8NGY9 312 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 SELENOMQ8WWX9 145 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 SMPDL3AQ92484 453 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 SNX19Q92543 992 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 KLHL29Q96CT2 875 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 MTFMTQ96DP5 389 aaKnown RBP10.61□□□□□ -0.71
ECM1-201ENST00000346569 FRG2BQ96QU4 278 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 BTBD10Q9BSF8 475 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 BRINP2Q9C0B6 783 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 C1orf21Q9H246 121 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 KIR3DX1Q9H7L2 352 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 CCDC177Q9NQR7 707 aaPredicted RBP10.61□□□□□ -0.71
ECM1-201ENST00000346569 AASDHPPTQ9NRN7 309 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 IMP3Q9NV31 184 aaKnown RBP10.61□□□□□ -0.71
ECM1-201ENST00000346569 SH2B3Q9UQQ2 575 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 COLEC10Q9Y6Z7 277 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 CACNA1IQ9P0X4 2223 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 ABCA7Q8IZY2 2146 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 VPS13AQ96RL7 3174 aa10.61□□□□□ -0.71
ECM1-201ENST00000346569 FAM86C2PA6NEL3 165 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms