RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 APOL4Q9BPW4 351 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF726A6NNF4 738 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 SCAMP1O15126 338 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 LDB2O43679 373 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 COQ9O75208 318 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 OR4F21O95013 312 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 SNX4O95219 450 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 ETV4P43268 484 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 POLR2JP52435 117 aaKnown RBP10.64□□□□□ -0.71
CLCN6-202ENST00000346436 SOX4Q06945 474 aaPredicted RBP10.64□□□□□ -0.71
CLCN6-202ENST00000346436 PPP1R8Q12972 351 aaKnown RBP10.64□□□□□ -0.71
CLCN6-202ENST00000346436 KCNA7Q96RP8 456 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 C1orf21Q9H246 121 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 METTL7AQ9H8H3 244 aa10.64□□□□□ -0.71
CLCN6-202ENST00000346436 EIF2B4Q9UI10 523 aaKnown RBP10.64□□□□□ -0.71
CLCN6-202ENST00000346436 DNMT3AQ9Y6K1 912 aaPredicted RBP10.64□□□□□ -0.71
CLCN6-202ENST00000346436 MYL12BO14950 172 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 CLIC3O95833 236 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 SHMT2P34897 504 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 RPS3AP61247 264 aaKnown RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 EIF3MQ7L2H7 374 aaKnown RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 OAFQ86UD1 273 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 TXNDC5Q8NBS9 432 aaKnown RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 PNPT1Q8TCS8 783 aaKnown RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 SMPDL3AQ92484 453 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 SMOQ99835 787 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ALG2Q9H553 416 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 LOC100506127A0A0U1RQW1 187 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 C2orf74A8MZ97 194 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 GJB5O95377 273 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 PRG2P13727 222 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF8P17098 575 aaPredicted RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ITGA1P56199 1179 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 TAS2R41P59536 307 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 TDGQ13569 410 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 POMZP3Q6PJE2 187 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 TIFABQ6ZNK6 161 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 C2orf73Q8N5S3 287 aaPredicted RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 DCBLD2Q96PD2 775 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 KCNH6Q9H252 994 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 RNGTTO60942 597 aaKnown RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF623O75123 536 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 C5AR1P21730 350 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 CTBP2P56545 445 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 MTPNP58546 118 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ACY1Q03154 408 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 CYP4F3Q08477 520 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 GPRIN1Q7Z2K8 1008 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ARL14Q8N4G2 192 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 TERB1Q8NA31 727 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ZSCAN4Q8NAM6 433 aaPredicted RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 OR4A15Q8NGL6 344 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 TIGARQ9NQ88 270 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 MARK1Q9P0L2 795 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 GLS2Q9UI32 602 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 RPL26P61254 145 aaKnown RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 HKDC1Q2TB90 917 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 FAM91A1Q658Y4 838 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 HOPXQ9BPY8 73 aaPredicted RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 MOCS1Q9NZB8 636 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 POU2F3Q9UKI9 436 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ACSL5Q9ULC5 683 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 FAM86C2PA6NEL3 165 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 IQCF5A8MTL0 148 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 MFN2O95140 757 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 IDH2P48735 452 aaKnown RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 UGT2B15P54855 530 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 MRPL49Q13405 166 aaKnown RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 Q6ZVU0 165 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 NATD1Q8N6N6 113 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 COX18Q8N8Q8 333 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 TSSK3Q96PN8 268 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 OR52E6Q96RD3 313 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 PANX1Q96RD7 426 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 TRMOQ9BU70 441 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 C20orf27Q9GZN8 174 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 R3HDMLQ9H3Y0 253 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 AKTIPQ9H8T0 292 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF624Q9P2J8 865 aaPredicted RBP10.63□□□□□ -0.71
CLCN6-202ENST00000346436 PHF11Q9UIL8 331 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 PCDHGA2Q9Y5H1 932 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 PCDHGA11Q9Y5H2 935 aa10.63□□□□□ -0.71
CLCN6-202ENST00000346436 NPHS1O60500 1241 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 SNAP91O60641 907 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 LATS1O95835 1130 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CAPN1P07384 714 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 UGT1A6P19224 532 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CLCNKAP51800 687 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 WDR5P61964 334 aaKnown RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 NR0B2Q15466 257 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 SLC25A24Q6NUK1 477 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF783Q6ZMS7 281 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 BTN2A1Q7KYR7 527 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 OR8H2Q8N162 312 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 SFRP1Q8N474 314 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 NPY6RQ99463 290 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CLSTN3Q9BQT9 956 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 RIOK2Q9BVS4 552 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms