RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 KCNH6Q9H252 994 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 SPHK2Q9NRA0 654 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 TDP1Q9NUW8 608 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 KLHL42Q9P2K6 505 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 DENND4CQ5VZ89 1909 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 TRIM64CA6NLI5 447 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 GFYI3L273 518 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 TSPAN6O43657 245 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 SGTAO43765 313 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 HS6ST1O60243 411 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ERN1O75460 977 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ZNF682O95780 498 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 CDK4P11802 303 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 PRPS2P11908 318 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 AMD1P17707 334 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 CD22P20273 847 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 XPAP23025 273 aaPredicted RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 VIPR1P32241 457 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 PIGAP37287 484 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 LAPTM4AQ15012 233 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 LRRC26Q2I0M4 334 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 XKR6Q5GH73 641 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 PLEKHS1Q5SXH7 462 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 NOXRED1Q6NXP6 359 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 TMEM179BQ7Z7N9 219 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 SYT12Q8IV01 421 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 PNPT1Q8TCS8 783 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 SGCDQ92629 289 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 CMTM7Q96FZ5 175 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 HEPHQ9BQS7 1158 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 NAA50Q9GZZ1 169 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 DCAF13Q9NV06 445 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ITM2BQ9Y287 266 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ARHGEF33A8MVX0 844 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 E7EQ34 232 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 H0YAE9 185 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 MPC1LP0DKB6 136 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 POLR2EP19388 210 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 MAP4P27816 1152 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 POLR2IP36954 125 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 BDKRB1P46663 353 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 CTSCP53634 463 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 CBX2Q14781 532 aaPredicted RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 CDKL4Q5MAI5 379 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ZNF697Q5TEC3 545 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ZDHHC20Q5W0Z9 365 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ATG9BQ674R7 924 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ADNP2Q6IQ32 1131 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 CES5AQ6NT32 575 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 TMEM26Q6ZUK4 368 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 SPRED2Q7Z698 418 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 GPR149Q86SP6 731 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 L3MBTL4Q8NA19 623 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ING5Q8WYH8 240 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 EXD2Q9NVH0 621 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 ERVW-1Q9UQF0 538 aa14.46□□□□□ -0.09
VIPAS39-202ENST00000343765 FAM220BPB1ANY3 271 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 PER2O15055 1255 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 CTSLP07711 333 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 CYP2A6P11509 494 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 NAE1Q13564 534 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 TSTA3Q13630 321 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 GGTA1PQ4G0N0 100 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 BRAT1Q6PJG6 821 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 ZNF551Q7Z340 670 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 RAVER1Q8IY67 606 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 LEMD2Q8NC56 503 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 ASZ1Q8WWH4 475 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 ERLEC1Q96DZ1 483 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 REXO4Q9GZR2 422 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 TRIM64A6NGJ6 449 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 EIF3FO00303 357 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 CPSF4O95639 269 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 MAPK1P28482 360 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 PTPN6P29350 595 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 KIR3DL1P43629 444 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 ELMSAN1Q6PJG2 1045 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 GALNT13Q8IUC8 556 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 PANX1Q96RD7 426 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 MBOAT4Q96T53 435 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 AMBRA1Q9C0C7 1298 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 PRUNE2Q8WUY3 3088 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 hCG_2014768A0A024R1R8 64 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 FOXD2O60548 495 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 MOSPD3O75425 235 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 RHOP08100 348 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 TIMP2P16035 220 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 NRIP1P48552 1158 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 SP140Q13342 867 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 LRIF1Q5T3J3 769 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 ZCCHC8Q6NZY4 707 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 ZNF621Q6ZSS3 439 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 THOC6Q86W42 341 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 CALHM3Q86XJ0 350 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 C8orf59Q8N0T1 100 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 LMNTD1Q8N9Z9 388 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 FRS2Q8WU20 508 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 ZSWIM3Q96MP5 696 aa14.45□□□□□ -0.1
VIPAS39-202ENST00000343765 WRAP53Q9BUR4 548 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms