RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 OTUD4Q01804 1114 aaKnown RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 LGALS3BPQ08380 585 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ATP1A4Q13733 1029 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SERTAD2Q14140 314 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ZNF528Q3MIS6 628 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 LRRC66Q68CR7 880 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 BICRALQ6AI39 1079 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 MFSD7Q6UXD7 560 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 STRA8Q7Z7C7 330 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 IQCHQ86VS3 1027 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 TRIM69Q86WT6 500 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 CPXM2Q8N436 756 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SPATA6LQ8N4H0 392 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 BPIFA3Q9BQP9 254 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SNRNP25Q9BV90 132 aaKnown RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SMOC2Q9H3U7 446 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 TAC3Q9UHF0 121 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PLIN4Q96Q06 1357 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 A0A1W2PPH5 198 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 CCDC162PA2VCL2 907 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 RNASET2O00584 256 aaKnown RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 VILLO15195 856 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ZNF823P16415 610 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 EPHA8P29322 1005 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PTGS2P35354 604 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SERPINB8P50452 374 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 GUCY2DQ02846 1103 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 IL17AQ16552 155 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 TAZQ16635 292 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 MEP1AQ16819 746 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 WIPI1Q5MNZ9 446 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 VHLLQ6RSH7 139 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PPIL6Q8IXY8 311 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 CALML5Q9NZT1 146 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SALL4Q9UJQ4 1053 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 FBXO2Q9UK22 296 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ATP23Q9Y6H3 246 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ULK1O75385 1050 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 GLCEO94923 617 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SLC34A2O95436 690 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 OAS1P00973 400 aaKnown RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 GLB1P16278 677 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PCGF2P35227 344 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 CDKN1CP49918 316 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PPIDQ08752 370 aaKnown RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 TMEM115Q12893 351 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ADGRE1Q14246 886 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 MELKQ14680 651 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 MSS51Q4VC12 460 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 N4BP2L1Q5TBK1 243 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SLC39A4Q6P5W5 647 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ASPGQ86U10 573 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PIAS4Q8N2W9 510 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 NAXEQ8NCW5 288 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 NUP37Q8NFH4 326 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 FAM76AQ8TAV0 307 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 MDM1Q8TC05 714 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 MAML1Q92585 1016 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 CADM1Q9BY67 442 aaKnown RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 MINDY3Q9H8M7 445 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SP140LQ9H930 580 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ASB6Q9NWX5 421 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PCDHGB6Q9Y5F9 930 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 GPR89AB7ZAQ6 455 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 CDC123O75794 336 aaPredicted RBP8.17□□□□□ -1.1
HMGB1-203ENST00000341423 GPR89BP0CG08 455 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 MPP7Q5T2T1 576 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 KCNMB4Q86W47 210 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 FTMTQ8N4E7 242 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 SCCPDHQ8NBX0 429 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 ACVR1CQ8NER5 493 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 ETNPPLQ8TBG4 499 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 UBXN10Q96LJ8 280 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 CHID1Q9BWS9 393 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 MIOSQ9NXC5 875 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 NDE1Q9NXR1 346 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 ACTL7BQ9Y614 415 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 A0A0J9YY10 115 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 PRSS38A1L453 326 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 AKAP10O43572 662 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 TRIM13O60858 407 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 PROSCO94903 275 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 CSNK2A2P19784 350 aaPredicted RBP8.17□□□□□ -1.1
HMGB1-203ENST00000341423 RORAP35398 523 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 UGT1A5P35504 534 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 PLK1P53350 603 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 ATP6V0D1P61421 351 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 MGAT5Q09328 741 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 RASGEF1BQ0VAM2 473 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 SLC14A2Q15849 920 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 CCDC137Q6PK04 289 aaKnown RBP8.17□□□□□ -1.1
HMGB1-203ENST00000341423 CLEC2AQ6UVW9 174 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 TRIM74Q86UV6 250 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 NUDT13Q86X67 352 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 CRYBG2Q8N1P7 616 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 ZSWIM2Q8NEG5 633 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 KIAA1191Q96A73 305 aa8.17□□□□□ -1.1
HMGB1-203ENST00000341423 FMO2Q99518 471 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms