RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZNF490Q9ULM2 529 aaPredicted RBP16.8■□□□□ 0.28
CLDN4-201ENST00000340958 SLC12A4Q9UP95 1085 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 PEX11AO75192 247 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 MTHFD1P11586 935 aaKnown RBP16.8■□□□□ 0.28
CLDN4-201ENST00000340958 EPORP19235 508 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 STX1BP61266 288 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 RACK1P63244 317 aaKnown RBP16.8■□□□□ 0.28
CLDN4-201ENST00000340958 FZD2Q14332 565 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 ARHGAP19Q14CB8 494 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 SPRED3Q2MJR0 410 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 ATP6AP1LQ52LC2 224 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 LIPJQ5W064 366 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 LARP4Q71RC2 724 aaKnown RBP eCLIP16.8■□□□□ 0.289e-10■□□□□ 9.2
CLDN4-201ENST00000340958 TAF8Q7Z7C8 310 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 LMNTD1Q8N9Z9 388 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 CXorf40BQ96DE9 158 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 ORAI3Q9BRQ5 295 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 MRGBPQ9NV56 204 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 ZSCAN32Q9NX65 697 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 GPRC5BQ9NZH0 403 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 PNMA8BQ9ULN7 279 aaPredicted RBP16.8■□□□□ 0.28
CLDN4-201ENST00000340958 SLCO1B1Q9Y6L6 691 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 TRBV23OR9-2A0A075B6M9 112 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 MANBAO00462 879 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 RGS14O43566 566 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 UNC5CO95185 931 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 BCKDHBP21953 392 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 CALB2P22676 271 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 FNTBP49356 437 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 HTR6P50406 440 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 ABRAXAS2Q15018 415 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 RPS6KA2Q15349 733 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 NR6A1Q15406 480 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 KIF19Q2TAC6 998 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 PRAMEF14Q5SWL7 426 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 PRAMEF13Q5VWM6 474 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 LAYNQ6UX15 382 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 TMPRSS11BQ86T26 416 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 TRIM48Q8IWZ4 208 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 KLHDC8AQ8IYD2 350 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 ZBTB44Q8NCP5 570 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 SELENOMQ8WWX9 145 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 CMTM5Q96DZ9 223 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 CAMK1GQ96NX5 476 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 OR4K3Q96R72 315 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 GIMAP2Q9UG22 337 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 TAGLN3Q9UI15 199 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 ST14Q9Y5Y6 855 aa16.79■□□□□ 0.28
CLDN4-201ENST00000340958 CAPN14A8MX76 684 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 SLC28A1O00337 649 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 UGDHO60701 494 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 HNRNPCL1O60812 293 aaKnown RBP16.78■□□□□ 0.28
CLDN4-201ENST00000340958 JUPP14923 745 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 NDUFS1P28331 727 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 NBL1P41271 181 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 MXRA7P84157 204 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 EIF2B5Q13144 721 aaKnown RBP16.78■□□□□ 0.28
CLDN4-201ENST00000340958 GRB7Q14451 532 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 ZRSR2Q15696 482 aaKnown RBP16.78■□□□□ 0.28
CLDN4-201ENST00000340958 GGTA1PQ4G0N0 100 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 WDR45BQ5MNZ6 344 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 FAM91A1Q658Y4 838 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 ABRAXAS1Q6UWZ7 409 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 L3MBTL4Q8NA19 623 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 SETD7Q8WTS6 366 aaKnown RBP16.78■□□□□ 0.28
CLDN4-201ENST00000340958 HAUS8Q9BT25 410 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 ACAT2Q9BWD1 397 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 SGPP1Q9BX95 441 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 RAB11FIP5Q9BXF6 653 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLDN4-201ENST00000340958 SCHIP1Q9P0W5 487 aaPredicted RBP16.78■□□□□ 0.28
CLDN4-201ENST00000340958 APOBEC3BQ9UH17 382 aaKnown RBP16.78■□□□□ 0.28
CLDN4-201ENST00000340958 PCDHGA2Q9Y5H1 932 aa16.78■□□□□ 0.28
CLDN4-201ENST00000340958 COPG1Q9Y678 874 aaKnown RBP16.78■□□□□ 0.28
CLDN4-201ENST00000340958 PRR19A6NJB7 356 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 JUNDP17535 347 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 HOXA6P31267 233 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 RAB28P51157 221 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 KLF10Q13118 480 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 DOC2AQ14183 400 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 SQLEQ14534 574 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 HIST2H2ACQ16777 129 aaPredicted RBP16.77■□□□□ 0.28
CLDN4-201ENST00000340958 HIST2H2AA3Q6FI13 130 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 ZC3H14Q6PJT7 736 aaKnown RBP16.77■□□□□ 0.28
CLDN4-201ENST00000340958 WASH2PQ6VEQ5 465 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 LPCAT2Q7L5N7 544 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 PACS2Q86VP3 889 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 TREML1Q86YW5 311 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 FNDC5Q8NAU1 212 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 SLC5A11Q8WWX8 675 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 SMPDL3AQ92484 453 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 NEIL2Q969S2 332 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 KLHL29Q96CT2 875 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 TCEAL2Q9H3H9 227 aaPredicted RBP16.77■□□□□ 0.28
CLDN4-201ENST00000340958 XKR8Q9H6D3 395 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 TM9SF3Q9HD45 589 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 WASH6PQ9NQA3 447 aa16.77■□□□□ 0.28
CLDN4-201ENST00000340958 LOC100653049A0A140TA62 436 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 TLR4O00206 839 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 KRT34O76011 436 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms