RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 SH3RF2Q8TEC5 729 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 PHF10Q8WUB8 498 aaKnown RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 PTPN18Q99952 460 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 RMI1Q9H9A7 625 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 TRMT13Q9NUP7 481 aaKnown RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 MSRAQ9UJ68 235 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 GLYATL1P3A0A0U1RQE8 302 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 GNG14A0A1W2PPG7 69 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 MAGEB17A8MXT2 336 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 SLC16A6O15403 523 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 ITGB1P05556 798 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 XPAP23025 273 aaPredicted RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 POU1F1P28069 291 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 CDC42P60953 191 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 ADAM17P78536 824 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 ABRQ12979 859 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 BOP1Q14137 746 aaKnown RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 KEAP1Q14145 624 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 C18orf21Q32NC0 220 aaPredicted RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 TPRG1LQ5T0D9 272 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 AGAP7PQ5VUJ5 663 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 TUBA3EQ6PEY2 450 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 UBE2R2Q712K3 238 aaPredicted RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 PRSS48Q7RTY5 328 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 TSPYL5Q86VY4 417 aaPredicted RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 NETO1Q8TDF5 533 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 SGCDQ92629 289 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 ATP13A3Q9H7F0 1226 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 SAGE1Q9NXZ1 904 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 NEU3Q9UQ49 428 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 PCDHB14Q9Y5E9 798 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 PCDHGB3Q9Y5G1 929 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 IGLV3-10A0A075B6K4 115 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 EFCAB10A6NFE3 127 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 ADAM23O75077 832 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 WISP3O95389 354 aaPredicted RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 PRPS1L1P21108 318 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 MAPK8P45983 427 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 ISL1P61371 349 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 SMARCB1Q12824 385 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 PYCR3Q53H96 274 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 GTF2IRD2BQ6EKJ0 949 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 OR4F3Q6IEY1 312 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 SNX20Q7Z614 316 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 GTF2IRD2Q86UP8 949 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 ZZZ3Q8IYH5 903 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 PJA1Q8NG27 643 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 COPS8Q99627 209 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 CHCHD6Q9BRQ6 235 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 C2orf49Q9BVC5 232 aaPredicted RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 THUMPD1Q9NXG2 353 aaKnown RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 ERVW-1Q9UQF0 538 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 RNF6Q9Y252 685 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 WBP11Q9Y2W2 641 aaKnown RBP9.2□□□□□ -0.94
TRERF1-201ENST00000340840 OARD1Q9Y530 152 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 SNX8Q9Y5X2 465 aa9.2□□□□□ -0.94
TRERF1-201ENST00000340840 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ADAMDEC1O15204 470 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SEPT4O43236 478 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ARHGEF9O43307 516 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 KLK8O60259 260 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 NBNO60934 754 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 GLUD1P00367 558 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 C9P02748 559 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 GSTT2P0CG29 244 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 GSTT2BP0CG30 244 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 EN2P19622 333 aaPredicted RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 CORO1AP31146 461 aaKnown RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 TUFMP49411 452 aaKnown RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 PGFP49763 221 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 CLDN8P56748 225 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 AP1S1P61966 158 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 CYP4F2P78329 520 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 AQP6Q13520 282 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ZNF181Q2M3W8 571 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 CTU2Q2VPK5 515 aaKnown RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SYTL3Q4VX76 610 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 PDE12Q6L8Q7 609 aaKnown RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 HS6ST3Q8IZP7 471 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 CLDN19Q8N6F1 224 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 MDGA1Q8NFP4 955 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 FAR1Q8WVX9 515 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 MBOAT4Q96T53 435 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 AMBNQ9NP70 447 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 EVLQ9UI08 416 aaPredicted RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 A8MX80 341 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 TNFRSF11BO00300 401 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 INHBBP09529 407 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ZNF865P0CJ78 1059 aaPredicted RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 BMP4P12644 408 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ENGP17813 658 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 AQP1P29972 269 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ALDH7A1P49419 539 aaKnown RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 HK3P52790 923 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 FBXO43Q4G163 708 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SLC32A1Q9H598 525 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 RETREG1Q9H6L5 497 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SACM1LQ9NTJ5 587 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SPASTQ9UBP0 616 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 LSM7Q9UK45 103 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms