RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PPM1NQ8N819 430 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 OR2L3Q8NG85 312 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 OR1L3Q8NH93 324 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 FBF1Q8TES7 1133 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 ZUFSPQ96AP4 578 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 RNF31Q96EP0 1072 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 CRELD1Q96HD1 420 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 RBBP8Q99708 897 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 ACAT2Q9BWD1 397 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 SLC12A9Q9BXP2 914 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 ACTR5Q9H9F9 607 aaPredicted RBP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 MRPS30Q9NP92 439 aaKnown RBP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 CCDC177Q9NQR7 707 aaPredicted RBP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 SMYD2Q9NRG4 433 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 KCND3Q9UK17 655 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 AP1M2Q9Y6Q5 423 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 ITPR1Q14643 2758 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 CXorf49A8MYA2 514 aaPredicted RBP18.46■□□□□ 0.55
SYNE4-202ENST00000340477 TARM1B6A8C7 271 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 PRICKLE3O43900 615 aaPredicted RBP18.46■□□□□ 0.55
SYNE4-202ENST00000340477 ENO2P09104 434 aaPredicted RBP18.46■□□□□ 0.55
SYNE4-202ENST00000340477 PSMB5P28074 263 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 DLSTP36957 453 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 AP1S2P56377 157 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 MC1RQ01726 317 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 FASTKQ14296 549 aaKnown RBP18.46■□□□□ 0.55
SYNE4-202ENST00000340477 USP10Q14694 798 aaKnown RBP18.46■□□□□ 0.55
SYNE4-202ENST00000340477 ZIC1Q15915 447 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 GRTP1Q5TC63 336 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 FIGLAQ6QHK4 219 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 SUSD1Q6UWL2 747 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 FAM20CQ8IXL6 584 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 ZNF480Q8WV37 535 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 PCBD2Q9H0N5 130 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 GPAMQ9HCL2 828 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 FAM60AQ9NP50 221 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 ABCF3Q9NUQ8 709 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 ARL15Q9NXU5 204 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 ANKMY1Q9P2S6 941 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 PCDHGA4Q9Y5G9 962 aa18.46■□□□□ 0.55
SYNE4-202ENST00000340477 ZNF891A8MT65 544 aaPredicted RBP18.45■□□□□ 0.54
SYNE4-202ENST00000340477 ZSCAN9O15535 394 aaPredicted RBP18.45■□□□□ 0.54
SYNE4-202ENST00000340477 PIAS1O75925 651 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 CCND1P24385 295 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 TAS2R39P59534 338 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 ABATP80404 500 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 SLMAPQ14BN4 828 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 KIAA1614Q5VZ46 1190 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 TLDC1Q6P9B6 456 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 FRA10AC1Q70Z53 315 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 OR2A1Q8NGT9 310 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 SNRNP27Q8WVK2 155 aaKnown RBP18.45■□□□□ 0.54
SYNE4-202ENST00000340477 ATL1Q8WXF7 558 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 MR1Q95460 341 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 PDLIM5Q96HC4 596 aaKnown RBP18.45■□□□□ 0.54
SYNE4-202ENST00000340477 LRFN5Q96NI6 719 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 CYTH2Q99418 400 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 LHX9Q9NQ69 397 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 TXLNGQ9NUQ3 528 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 TAC3Q9UHF0 121 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 CROTQ9UKG9 612 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 ADAMTS6Q9UKP5 1117 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 SRPK3Q9UPE1 567 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 PDE10AQ9Y233 779 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 KLHL20Q9Y2M5 609 aa18.45■□□□□ 0.54
SYNE4-202ENST00000340477 FAM208BQ5VWN6 2430 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 LOC101059948A0A1B0GTJ6 334 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 A0A1W2PPV9 198 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 C21orf140B9A014 251 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 E7ENX8 843 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 TSPAN12O95859 305 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 STMN1P16949 149 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 IMPA1P29218 277 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 GRIA3P42263 894 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 RHDQ02161 417 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 TAP2Q03519 686 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 TCTE1Q5JU00 501 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 ICE2Q659A1 982 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 ADAMTSL2Q86TH1 951 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 RELL1Q8IUW5 271 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 DNAJC22Q8N4W6 341 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 TTC29Q8NA56 475 aaPredicted RBP18.44■□□□□ 0.54
SYNE4-202ENST00000340477 PPFIBP2Q8ND30 876 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 ANKRD7Q92527 254 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 DLG3Q92796 817 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 MED8Q96G25 268 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 GPR22Q99680 433 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 DPH2Q9BQC3 489 aaPredicted RBP18.44■□□□□ 0.54
SYNE4-202ENST00000340477 SELENOSQ9BQE4 189 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 NDC1Q9BTX1 674 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 EURLQ9NYK6 297 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 STOX2Q9P2F5 926 aaPredicted RBP18.44■□□□□ 0.54
SYNE4-202ENST00000340477 MTO1Q9Y2Z2 717 aaKnown RBP18.44■□□□□ 0.54
SYNE4-202ENST00000340477 ANKRD12Q6UB98 2062 aa18.44■□□□□ 0.54
SYNE4-202ENST00000340477 ZNF749O43361 778 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 RHOXF2BP0C7M4 288 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 TCN2P20062 427 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 AGXTP21549 392 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 TBPL1P62380 186 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 SRSF6Q13247 344 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms