RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 PSKH2Q96QS6 385 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 TNKS2Q9H2K2 1166 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 TAS2R16Q9NYV7 291 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 PDP1Q9P0J1 537 aaPredicted RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 FAM8A1Q9UBU6 413 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 NAALAD2Q9Y3Q0 740 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 GMPPBQ9Y5P6 360 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 NOTOA8MTQ0 251 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 PFDN6O15212 129 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 RECQL5O94762 991 aaPredicted RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 EPOP01588 193 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 DBTP11182 482 aaKnown RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 CD36P16671 472 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 PCYT1AP49585 367 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 TTPAP49638 278 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 GABARAPL2P60520 117 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 HIST2H2ACQ16777 129 aaPredicted RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 ZXDCQ2QGD7 858 aaPredicted RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 CYP27C1Q4G0S4 372 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 GPR153Q6NV75 609 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 EFL1Q7Z2Z2 1120 aaKnown RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 MRPL10Q7Z7H8 261 aaKnown RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 GPR149Q86SP6 731 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 LGALS12Q96DT0 336 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 ZBTB18Q99592 522 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 SH3GL1Q99961 368 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 ACPTQ9BZG2 426 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 TRIT1Q9H3H1 467 aaKnown RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 LRTM1Q9HBL6 345 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 USE1Q9NZ43 259 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 MBD1Q9UIS9 605 aaPredicted RBP11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 PLXNA4Q9HCM2 1894 aa11.65□□□□□ -0.54
CCDC144CP-201ENST00000340196 PCDHGA12O60330 932 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ULK1O75385 1050 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 SLC25A14O95258 325 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 PGLSO95336 258 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 VNN2O95498 520 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 OTCP00480 354 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 KLKB1P03952 638 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 NUDT7P0C024 238 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 HOXB8P17481 243 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 CR2P20023 1033 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 MRPL19P49406 292 aaKnown RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 CLLU1OSQ5K130 101 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ZCCHC8Q6NZY4 707 aaKnown RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 RNF180Q86T96 592 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 PAF1Q8N7H5 531 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ZNF641Q96N77 438 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 CTRCQ99895 268 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 GPR62Q9BZJ7 368 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 WDR12Q9GZL7 423 aaKnown RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 DSN1Q9H410 356 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ACOT13Q9NPJ3 140 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 C1orf109Q9NX04 203 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 QPCTLQ9NXS2 382 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 SLC6A14Q9UN76 642 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 EIF3LQ9Y262 564 aaKnown RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ARIH1Q9Y4X5 557 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 LOC100506127A0A0U1RQW1 187 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 TNFRSF10AO00220 468 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 KCNK2O95069 426 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 PRAMEF1O95521 474 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 CD160O95971 181 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 PDYNP01213 254 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ABCB1P08183 1280 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 COL6A1P12109 1028 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 TGFBR2P37173 567 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 VEGFBP49765 207 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 GZMMP51124 257 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 FAM26DQ5JW98 314 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 RTN4RL1Q86UN2 441 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 SERPINA9Q86WD7 417 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 SVOPLQ8N434 492 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 TTC30BQ8N4P2 665 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 DNASE1L2Q92874 299 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 NACC2Q96BF6 587 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 PYURFQ96I23 114 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 DACH2Q96NX9 599 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 CPPED1Q9BRF8 314 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 FBXO44Q9H4M3 255 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 CLMPQ9H6B4 373 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 TMEM184CQ9NVA4 438 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 NUDT4Q9NZJ9 180 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 TRBV5-3A0A0A0MS03 114 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 H3BNC9 293 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 GPR37O15354 613 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 WBP4O75554 376 aaKnown RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 DLGAP3O95886 979 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 NPPAP01160 153 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 RPL17P18621 184 aaKnown RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 MSH3P20585 1137 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 GNPDA1P46926 289 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ACLYP53396 1101 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 PRMT2P55345 433 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ARF5P84085 180 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 DGUOKQ16854 277 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 USP39Q53GS9 565 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms