RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 C19orf60Q96EN9 201 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 DCSTAMPQ9H295 470 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 ZBTB20Q9HC78 741 aaPredicted RBP12.3□□□□□ -0.44
DFFB-202ENST00000339350 MID1IP1Q9NPA3 183 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 EXD2Q9NVH0 621 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 LRFN2Q9ULH4 789 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 TBC1D24Q9ULP9 559 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 KLHL20Q9Y2M5 609 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 NCF1BA6NI72 391 aaPredicted RBP12.3□□□□□ -0.44
DFFB-202ENST00000339350 NCF1CA8MVU1 366 aaPredicted RBP12.3□□□□□ -0.44
DFFB-202ENST00000339350 F8W036 122 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 PIP5K1BO14986 540 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 MAFKO60675 156 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 SLC22A5O76082 557 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 NCF1P14598 390 aaPredicted RBP12.3□□□□□ -0.44
DFFB-202ENST00000339350 PNPLA4P41247 253 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 PSMD8P48556 350 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 GZMKP49863 264 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 WNT3AP56704 352 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 PCDH1Q08174 1060 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 SCAPQ12770 1279 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 SIM2Q14190 667 aaPredicted RBP12.3□□□□□ -0.44
DFFB-202ENST00000339350 C6orf141Q5SZD1 244 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 FCRLBQ6BAA4 426 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 BHLHA9Q7RTU4 235 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 P3H2Q8IVL5 708 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 CAMKK1Q8N5S9 505 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 ENKURQ8TC29 256 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 ESAMQ96AP7 390 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 PABPC5Q96DU9 382 aaKnown RBP12.3□□□□□ -0.44
DFFB-202ENST00000339350 TMEM74Q96NL1 305 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 TMEM209Q96SK2 561 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 SLC9A7Q96T83 725 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 VAT1Q99536 393 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 RRAGCQ9HB90 399 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 EML4Q9HC35 981 aaKnown RBP12.3□□□□□ -0.44
DFFB-202ENST00000339350 NT5MQ9NPB1 228 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 STOML2Q9UJZ1 356 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 PRELID3BQ9Y3B1 194 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 DNAJC15Q9Y5T4 150 aa12.3□□□□□ -0.44
DFFB-202ENST00000339350 A0A087X1B8 175 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 UBXN8O00124 270 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 DNTTP04053 509 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 SLC15A1P46059 708 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 DIO3P55073 304 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 ZNF273Q14593 569 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 PSMD5Q16401 504 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CYP51A1Q16850 503 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 PFKFB4Q16877 469 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CYP27C1Q4G0S4 372 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 RTP2Q5QGT7 225 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 PAMR1Q6UXH9 720 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 LARP4Q71RC2 724 aaKnown RBP eCLIP12.29□□□□□ -0.44
DFFB-202ENST00000339350 C8orf59Q8N0T1 100 aaPredicted RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 C2orf69Q8N8R5 385 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CHDHQ8NE62 594 aaPredicted RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 OR10T2Q8NGX3 314 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 NCLNQ969V3 563 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 TUBGCP3Q96CW5 907 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 TRMT61AQ96FX7 289 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 PAWRQ96IZ0 340 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 MMP27Q9H306 513 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CATSPERBQ9H7T0 1116 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 SLAMF8Q9P0V8 285 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 TSR3Q9UJK0 312 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 GMPPBQ9Y5P6 360 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 SLC12A8A0AV02 714 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 METTL15A6NJ78 407 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 PAGE1O75459 146 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CD86P42081 329 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CCT3P49368 545 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 POU4F1Q01851 419 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 FRG1Q14331 258 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 INPP5AQ14642 412 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 RPS6KA2Q15349 733 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CTU2Q2VPK5 515 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 LAMTOR1Q6IAA8 161 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 RETSATQ6NUM9 610 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CNTN4Q8IWV2 1026 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 PTGR2Q8N8N7 351 aaPredicted RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 ZNF416Q9BWM5 594 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 RANBP3Q9H6Z4 567 aaPredicted RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 TREX1Q9NSU2 369 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CMTM6Q9NX76 183 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 MIOSQ9NXC5 875 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 FNDC3AQ9Y2H6 1198 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 PCDHGA9Q9Y5G4 932 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 U3KQV3 271 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 NYNRINQ9P2P1 1898 aaKnown RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 H0YAE9 185 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 ANGPT2O15123 496 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 ANXA9O76027 345 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 ACADMP11310 421 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 PAMP19021 973 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 GPX3P22352 226 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CYP4F2P78329 520 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 ZNF45Q02386 682 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 CYP4F3Q08477 520 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 IRF3Q14653 427 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms