RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 INHBBP09529 407 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 CCDC159P0C7I6 412 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 PIRTP0C851 137 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 ITGAMP11215 1152 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 MTHFD1P11586 935 aaKnown RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 PRPS2P11908 318 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 HOXB9P17482 250 aaPredicted RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 DDX6P26196 483 aaKnown RBP eCLIP10.51□□□□□ -0.73
RTN3-201ENST00000338850 MAPK1P28482 360 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 CORO1AP31146 461 aaKnown RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 MAGEA2P43356 314 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 C21orf58P58505 322 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 RPS24P62847 133 aaKnown RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 DMWDQ09019 674 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 ABRQ12979 859 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 SP140Q13342 867 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 CCINQ13939 588 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 RAB39AQ14964 217 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 PON2Q15165 354 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 NR6A1Q15406 480 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 DPY19L1Q2PZI1 675 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 AP5B1Q2VPB7 878 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 ITPRIPL2Q3MIP1 535 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 RUNDC3AQ59EK9 446 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 ZRANB3Q5FWF4 1079 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 ARMC12Q5T9G4 340 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 CACHD1Q5VU97 1274 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 TXNDC8Q6A555 127 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 IL27RAQ6UWB1 636 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 NEK10Q6ZWH5 1172 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 LRRC70Q7Z2Q7 622 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 CDYL2Q8N8U2 506 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 OR2T12Q8NG77 320 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 OR52B6Q8NGF0 335 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 PIH1D2Q8WWB5 315 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 CYGBQ8WWM9 190 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 MRPS31Q92665 395 aaKnown RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 GTF2H4Q92759 462 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 ACDQ96AP0 544 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 TESCQ96BS2 214 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 VPS50Q96JG6 964 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 FCRL1Q96LA6 429 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 COG8Q96MW5 612 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 FAM210AQ96ND0 272 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 CD244Q9BZW8 370 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 TDP1Q9NUW8 608 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 FAIMQ9NVQ4 179 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 C2orf42Q9NWW7 574 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 GALNT8Q9NY28 637 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 DLL3Q9NYJ7 618 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 TRPM5Q9NZQ8 1165 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 HECAQ9UBI9 543 aaPredicted RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 MAPRE3Q9UPY8 281 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 NCOR2Q9Y618 2525 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 ANKRD12Q6UB98 2062 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 KIF26AQ9ULI4 1882 aaPredicted RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 A0A096LPI6 279 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 A0A1W2PQ67 120 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 FAM149AA5PLN7 773 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 CHURC1-FNTBB4DL54 471 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 M0QX08 132 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 GAPDHSO14556 408 aaPredicted RBP10.5□□□□□ -0.73
RTN3-201ENST00000338850 WNT9AO14904 365 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 SLC16A5O15375 505 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 SLC16A6O15403 523 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 KRT6AP02538 564 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 KLKB1P03952 638 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 KRT6BP04259 564 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 PRSS56P0CW18 603 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 G6PDP11413 515 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 PFKLP17858 780 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 UGT1A6P19224 532 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 TGM1P22735 817 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 ACRV1P26436 265 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 RYKP34925 604 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 GNPDA1P46926 289 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 KRT6CP48668 564 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 FNTBP49356 437 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 HTR6P50406 440 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 CLDN8P56748 225 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 CXCR4P61073 352 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 ECT2LQ008S8 904 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 CYP4F3Q08477 520 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 ABHD18Q0P651 414 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 GBX1Q14549 363 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 PUM1Q14671 1186 aaKnown RBP eCLIP10.5□□□□□ -0.73
RTN3-201ENST00000338850 MOGQ16653 247 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 MPP7Q5T2T1 576 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 GPRC6AQ5T6X5 926 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 RNF219Q5W0B1 726 aaPredicted RBP10.5□□□□□ -0.73
RTN3-201ENST00000338850 GRAMD4Q6IC98 578 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 SLC2A7Q6PXP3 512 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 MILR1Q7Z6M3 343 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 HIPK1Q86Z02 1210 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 ZDHHC13Q8IUH4 622 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 MICU2Q8IYU8 434 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 C8orf59Q8N0T1 100 aaPredicted RBP10.5□□□□□ -0.73
RTN3-201ENST00000338850 SYNPOQ8N3V7 929 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 ZCCHC7Q8N3Z6 543 aaKnown RBP10.5□□□□□ -0.73
RTN3-201ENST00000338850 CPA6Q8N4T0 437 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms