RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CHST11Q9NPF2 352 aa10.98□□□□□ -0.65
CSMD2-202ENST00000338325 PIH1D1Q9NWS0 290 aaKnown RBP10.98□□□□□ -0.65
CSMD2-202ENST00000338325 PTGFRNQ9P2B2 879 aa10.98□□□□□ -0.65
CSMD2-202ENST00000338325 ZNF282Q9UDV7 671 aaPredicted RBP10.98□□□□□ -0.65
CSMD2-202ENST00000338325 C3orf18Q9UK00 162 aa10.98□□□□□ -0.65
CSMD2-202ENST00000338325 FAM169AQ9Y6X4 670 aa10.98□□□□□ -0.65
CSMD2-202ENST00000338325 NSG1A0A0A6YYJ2 146 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 TRGV8A0A0C4DH27 118 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 HYKKA2RU49 373 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 CCDC162PA2VCL2 907 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 OR1I1O60431 355 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 SRPX2O60687 465 aaPredicted RBP10.97□□□□□ -0.65
CSMD2-202ENST00000338325 CTSVO60911 334 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 MED26O95402 600 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 PRR35P0CG20 571 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 COX6A1P12074 109 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 COX6B1P14854 86 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 HTR1EP28566 365 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 CCR7P32248 378 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 MAGEA1P43355 309 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 VSX2P58304 361 aaPredicted RBP10.97□□□□□ -0.65
CSMD2-202ENST00000338325 HSPA14Q0VDF9 509 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 ZNF630Q2M218 657 aaPredicted RBP10.97□□□□□ -0.65
CSMD2-202ENST00000338325 WASHC2DQ5SRD0 308 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 ATG9BQ674R7 924 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 PRMT9Q6P2P2 845 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 MTFR2Q6P444 385 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 TMEM207Q6UWW9 146 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 RPTNQ6XPR3 784 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 NDUFAF7Q7L592 441 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 MRGPRGQ86SM5 289 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 CNGA4Q8IV77 575 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 PRSS58Q8IYP2 241 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 CFAP61Q8NHU2 1237 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 BRIX1Q8TDN6 353 aaKnown RBP10.97□□□□□ -0.65
CSMD2-202ENST00000338325 PSMF1Q92530 271 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 HAS2Q92819 552 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 ZUFSPQ96AP4 578 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 TTC1Q99614 292 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 TSSK1BQ9BXA7 367 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 RAB11FIP5Q9BXF6 653 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 PLA2G3Q9NZ20 509 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 SLC39A10Q9ULF5 831 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 PCDHA3Q9Y5H8 950 aa10.97□□□□□ -0.65
CSMD2-202ENST00000338325 NCOA6Q14686 2063 aaPredicted RBP10.96□□□□□ -0.65
CSMD2-202ENST00000338325 DCHS2Q6V1P9 2916 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 POLQO75417 2590 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 TARM1B6A8C7 271 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 CCL21O00585 134 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 PRICKLE3O43900 615 aaPredicted RBP10.96□□□□□ -0.65
CSMD2-202ENST00000338325 GPC4O75487 556 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 TJP3O95049 919 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 UNC5CO95185 931 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 METTL18O95568 372 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 UQCRHP07919 91 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 SNRPB2P08579 225 aaKnown RBP10.96□□□□□ -0.65
CSMD2-202ENST00000338325 FBLP22087 321 aaKnown RBP10.96□□□□□ -0.65
CSMD2-202ENST00000338325 CA7P43166 264 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.96□□□□□ -0.65
CSMD2-202ENST00000338325 FRMPD2BQ6IN97 320 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 CNSTQ6PJW8 725 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 AFTPHQ6ULP2 937 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 SIRT6Q8N6T7 355 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 LKAAEAR1Q8TD35 194 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 ASZ1Q8WWH4 475 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 CARD6Q9BX69 1037 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSMD2-202ENST00000338325 ABI3Q9P2A4 366 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 TFR2Q9UP52 801 aa10.96□□□□□ -0.65
CSMD2-202ENST00000338325 MRPS2Q9Y399 296 aaKnown RBP10.96□□□□□ -0.65
CSMD2-202ENST00000338325 PKDREJQ9NTG1 2253 aa10.96□□□□□ -0.66
CSMD2-202ENST00000338325 IGLV3-12A0A075B6K2 115 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 A0A1W2PQ72 361 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 PSMD3O43242 534 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 RASAL1O95294 804 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 BMP10O95393 424 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 CRYABP02511 175 aaKnown RBP10.95□□□□□ -0.66
CSMD2-202ENST00000338325 SERPINA7P05543 415 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 APOA4P06727 396 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 CETN2P41208 172 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 EEF1A2Q05639 463 aaKnown RBP10.95□□□□□ -0.66
CSMD2-202ENST00000338325 RBPJQ06330 500 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 MUM1Q2TAK8 710 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 P3H1Q32P28 736 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 CCDC38Q502W7 563 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 VWA2Q5GFL6 755 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 RNF44Q7L0R7 432 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 LINC00523Q86TU6 105 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 FAM71DQ8N9W8 422 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 OR13J1Q8NGT2 312 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 DNAJB8Q8NHS0 232 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 TRIM8Q9BZR9 551 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 SEC14L3Q9UDX4 400 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 ZC3H7BQ9UGR2 993 aaKnown RBP10.95□□□□□ -0.66
CSMD2-202ENST00000338325 KLK4Q9Y5K2 254 aa10.95□□□□□ -0.66
CSMD2-202ENST00000338325 LOC105369274A0A096LPK9 316 aa10.94□□□□□ -0.66
CSMD2-202ENST00000338325 IGHV1-45A0A0A0MS14 117 aa10.94□□□□□ -0.66
CSMD2-202ENST00000338325 LOC102723532A0A0G2JNH3 316 aa10.94□□□□□ -0.66
CSMD2-202ENST00000338325 A0A0J9YVX5 310 aa10.94□□□□□ -0.66
CSMD2-202ENST00000338325 IDSB3KWA1 339 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms