RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 MBOAT1Q6ZNC8 495 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 HDXQ7Z353 690 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 CLEC14AQ86T13 490 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 LRRC56Q8IYG6 542 aaPredicted RBP11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 PPFIBP2Q8ND30 876 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 RCBTB1Q8NDN9 531 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 OR2A1Q8NGT9 310 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 OR56A3Q8NH54 315 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 RHBDF1Q96CC6 855 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 TCTN2Q96GX1 697 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 TRAPPC9Q96Q05 1148 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 HAUS8Q9BT25 410 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 ACAT2Q9BWD1 397 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 SCNM1Q9BWG6 230 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 PITPNM3Q9BZ71 974 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 STMN4Q9H169 189 aaPredicted RBP11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 CENPHQ9H3R5 247 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 ZNF768Q9H5H4 540 aaKnown RBP11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 PDE7BQ9NP56 450 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 MRPS30Q9NP92 439 aaKnown RBP11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 RYDENQ9NUL5 291 aaKnown RBP11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 ZNF358Q9NW07 568 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 SOHLH2Q9NX45 425 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 NUDT4Q9NZJ9 180 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 GRID1Q9ULK0 1009 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 SNX7Q9UNH6 387 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 LOXL2Q9Y4K0 774 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 NEUROG3Q9Y4Z2 214 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 ASXL3Q9C0F0 2248 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 A0A1W2PPV9 198 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 NCF1BA6NI72 391 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 GOLGA6L10A6NI86 522 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 NCF1CA8MVU1 366 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 COPEO14579 308 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 PLD2O14939 933 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 SMIM24O75264 130 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 GLRA3O75311 464 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 IPO13O94829 963 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 TOP3BO95985 862 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 JMJD7P0C870 316 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 MYZAPP0CAP1 466 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 GFAPP14136 432 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 NCF1P14598 390 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 H2AFXP16104 143 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 KRT4P19013 534 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 TAC1P20366 129 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 RBMS1P29558 406 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 PEBP1P30086 187 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 CRHR1P34998 444 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 GGT5P36269 586 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 LSSP48449 732 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 PDX1P52945 283 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 ACY1Q03154 408 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 SLC18A2Q05940 514 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 C16orf72Q14CZ0 275 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 PTCHD3Q3KNS1 767 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 PRAMEF13Q5VWM6 474 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 FOXR1Q6PIV2 292 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 FIGLAQ6QHK4 219 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 TRIM73Q86UV7 250 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 BPHLQ86WA6 291 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 LSMEM2Q8N112 164 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 OR2L3Q8NG85 312 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 FLVCR1-AS1Q8TAF5 88 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 EXT2Q93063 718 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 SLC41A2Q96JW4 573 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 ATOH8Q96SQ7 321 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 SGPP1Q9BX95 441 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 CAPS2Q9BXY5 557 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 NRSN2Q9GZP1 204 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 IQCGQ9H095 443 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 MRPL46Q9H2W6 279 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 POLR1BQ9H9Y6 1135 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 WWOXQ9NZC7 414 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 SENP1Q9P0U3 644 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 TAC3Q9UHF0 121 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 PTBP2Q9UKA9 531 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 KLK13Q9UKR3 277 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 MSRB2Q9Y3D2 182 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 DYRK1BQ9Y463 629 aa11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 TNPO3Q9Y5L0 923 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 ZFC3H1O60293 1989 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-202ENST00000337841 TRABD2BA6NFA1 517 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 EFCAB7A8K855 629 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 FOXO6A8MYZ6 492 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 B4E171 279 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 UBXN8O00124 270 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 AGRPO00253 132 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 H2AFYO75367 372 aaKnown RBP11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 STK16O75716 305 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 PVRP15151 417 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 ST6GAL1P15907 406 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 NPPBP16860 134 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 TSPAN7P41732 249 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 GRIA3P42263 894 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 ALDH18A1P54886 795 aaKnown RBP11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 TBPL1P62380 186 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 MC2RQ01718 297 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms