RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ZIM2Q9NZV7 527 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 NUP50Q9UKX7 468 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 GTF2A1LQ9UNN4 478 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 PCDHB14Q9Y5E9 798 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 SLC7A4O43246 635 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 DGKAP23743 735 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 PGBD2Q6P3X8 592 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 TBPL2Q6SJ96 375 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 ANKHQ9HCJ1 492 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 MS4A12Q9NXJ0 267 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 MBD2Q9UBB5 411 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 NCKAP1Q9Y2A7 1128 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 ARID1BQ8NFD5 2236 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-201ENST00000337299 ARPC4-TTLL3A0A0A6YYG9 625 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 MATN3O15232 486 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 DNAJB5O75953 348 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 CCNB2O95067 398 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 WEE1P30291 646 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 EVI2BP34910 448 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 SMUG1Q53HV7 270 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 LRRC66Q68CR7 880 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 TRIM40Q6P9F5 258 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 CIR1Q86X95 450 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-201ENST00000337299 OR6K2Q8NGY2 324 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 GPR152Q8TDT2 470 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 GTF3C2Q8WUA4 911 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-201ENST00000337299 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
COL2A1-201ENST00000337299 SLC35F5Q8WV83 523 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 SERPINB11Q96P15 392 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 TTPALQ9BTX7 342 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 ATG10Q9H0Y0 220 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 SPO11Q9Y5K1 396 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 CLIC1O00299 241 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 ADAMDEC1O15204 470 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 KMOO15229 486 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 GLUD1P00367 558 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 CCNCP24863 283 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 CSTF2P33240 577 aaKnown RBP eCLIP12.94□□□□□ -0.34
COL2A1-201ENST00000337299 MAP2K3P46734 347 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 GABARAPL2P60520 117 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 PFKPQ01813 784 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 CAMK2GQ13555 558 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-201ENST00000337299 POU4F3Q15319 338 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 C16orf59Q7L2K0 433 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 CARNMT1Q8N4J0 409 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 GALNT11Q8NCW6 608 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 HSH2DQ96JZ2 352 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 KIFC1Q9BW19 673 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
COL2A1-201ENST00000337299 PDZD7Q9H5P4 517 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 GRIP1Q9Y3R0 1128 aa12.94□□□□□ -0.34
COL2A1-201ENST00000337299 SCO1O75880 301 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 CLTBP09497 229 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 LPOP22079 712 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 OR1E2P47887 323 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 LSMEM2Q8N112 164 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 PSMG2Q969U7 264 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SLCO4A1Q96BD0 722 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 TADA1Q96BN2 335 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 PCDHGB3Q9Y5G1 929 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 A8MUA0 341 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SEC14L2O76054 403 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 APOC3P02656 99 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 CAPNS1P04632 268 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 FGF1P05230 155 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 ALDOCP09972 364 aaKnown RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 HKDC1Q2TB90 917 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 C10orf62Q5T681 223 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 HIST2H2AA3Q6FI13 130 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 HACD2Q6Y1H2 254 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 VTCN1Q7Z7D3 282 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 LYSMD2Q8IV50 215 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SLC25A51Q9H1U9 297 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SLA2Q9H6Q3 261 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SMPD4Q9NXE4 827 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 RHCGQ9UBD6 479 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 ATPIF1Q9UII2 106 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 CMAHPQ9Y471 501 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 MAGEB17A8MXT2 336 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 NT5C1B-RDH14C9J2C7 533 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 STX11O75558 287 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 GPX3P22352 226 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 NOS3P29474 1203 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SETMARQ53H47 684 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 RNF219Q5W0B1 726 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SH2D5Q6ZV89 423 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 KRTCAP2Q8N6L1 136 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SPERTQ8NA61 448 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 C11orf65Q8NCR3 313 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 OR4A15Q8NGL6 344 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 RIT1Q92963 219 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 PYCR2Q96C36 320 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 ARPC5LQ9BPX5 153 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 GTPBP2Q9BX10 602 aaKnown RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 C1QTNF1Q9BXJ1 281 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 PLSCR3Q9NRY6 295 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms