RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SPANXN4Q5MJ08 99 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 DEPDC1Q5TB30 811 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PM20D1Q6GTS8 502 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 FAM171BQ6P995 826 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ALKAL1Q6UXT8 129 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 GALNT10Q86SR1 603 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 TMEM126BQ8IUX1 230 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 AQP12AQ8IXF9 295 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 OR8D1Q8WZ84 308 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PLD4Q96BZ4 506 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 OTUB1Q96FW1 271 aaPredicted RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 TSGA13Q96PP4 275 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 WDR12Q9GZL7 423 aaKnown RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ACTR3BQ9P1U1 418 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 DPP7Q9UHL4 492 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PLAGL1Q9UM63 463 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PCDHB3Q9Y5E6 796 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PCDHB1Q9Y5F3 818 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SCN4AP35499 1836 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SBF1O95248 1867 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 LEFTY2O00292 366 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SOD2P04179 222 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 S100A1P23297 94 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 MYF6P23409 242 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 RRM2P31350 389 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 TIE1P35590 1138 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 HPCAL1P37235 193 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ARSFP54793 590 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 MANFP55145 182 aaKnown RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 NCS1P62166 190 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 LMAN2Q12907 356 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 DAG1Q14118 895 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 RFTN1Q14699 578 aaPredicted RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SPCS2Q15005 226 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 OR4D1Q15615 310 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 CPTPQ5TA50 214 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ZNF549Q6P9A3 640 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 CYP20A1Q6UW02 462 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 HMGN2P46Q86SG4 172 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 P2RY8Q86VZ1 359 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ADGRG2Q8IZP9 1017 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 WDR48Q8TAF3 677 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PROX1Q92786 737 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ROPN1LQ96C74 230 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 CRISPLD1Q9H336 500 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SIAEQ9HAT2 523 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 KRT84Q9NSB2 600 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ADPRHL2Q9NX46 363 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 C3orf18Q9UK00 162 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 DUSP12Q9UNI6 340 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ERGIC3Q9Y282 383 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 DOCK3Q8IZD9 2030 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ARID1AO14497 2285 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ZNFX1Q9P2E3 1918 aaKnown RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 WASH3PC4AMC7 463 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 MUSKO15146 869 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 GMFGO60234 142 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ATG13O75143 517 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 BCAS1O75363 584 aaPredicted RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ACP5P13686 325 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SLC6A2P23975 617 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 IL12AP29459 219 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 POLR2IP36954 125 aaKnown RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 KCNAB2Q13303 367 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 TAB1Q15750 504 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SNAP47Q5SQN1 464 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ARMC4Q5T2S8 1044 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 OR4F3Q6IEY1 312 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ZNF773Q6PK81 442 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ISCA2Q86U28 154 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ADHFE1Q8IWW8 467 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ANKFN1Q8N957 763 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SLC47A1Q96FL8 570 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 RANBP9Q96S59 729 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 YIPF4Q9BSR8 244 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 TSEN34Q9BSV6 310 aaKnown RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 CD320Q9NPF0 282 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 AASDHPPTQ9NRN7 309 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 AHSPQ9NZD4 102 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 EHD3Q9NZN3 535 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PTBP2Q9UKA9 531 aaKnown RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 NDRG2Q9UN36 371 aaKnown RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 DNAJC15Q9Y5T4 150 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PMF1-BGLAPU3KQ54 211 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SPAG17Q6Q759 2223 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 RIF1Q5UIP0 2472 aaKnown RBP6.31□□□□□ -1.4
HMG20A-201ENST00000336216 C1QTNF3-AMACRE9PGA6 284 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 BCKDKO14874 412 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 SLC22A2O15244 555 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 KDELR3O43731 214 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 ADAMTS4O75173 837 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 LEFTY1O75610 366 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 ADH1CP00326 375 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 C8BP07358 591 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 ALPPL2P10696 532 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 BMP2P12643 396 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 CTSEP14091 401 aa6.31□□□□□ -1.4
HMG20A-201ENST00000336216 TNNI3P19429 210 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms